RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 OR56A4Q8NGH8 313 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ZNF641Q96N77 438 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ZNF570Q96NI8 536 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 HTATIP2Q9BUP3 242 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 CPEB1Q9BZB8 566 aaKnown RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 RAD51BO15315 384 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 FGF19O95750 216 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 NAT2P11245 290 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ATP1B2P14415 290 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 VIPR1P32241 457 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 RAP1GDS1P52306 607 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 NR6A1Q15406 480 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ZNF805Q5CZA5 627 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 EGFLAMQ63HQ2 1017 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 DRAXINQ8NBI3 349 aaPredicted RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ACTRT2Q8TDY3 377 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 TUBGCP5Q96RT8 1024 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 MRPL1Q9BYD6 325 aaKnown RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 C15orf41Q9Y2V0 281 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 TRBV5-4A0A0C4DH59 114 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 MRASO14807 208 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 RB1P06400 928 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 PSMC3P17980 439 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 GNAZP19086 355 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 CAPN3P20807 821 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 HOXA9P31269 272 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ACTR3P61158 418 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 DUSP6Q16828 381 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 PDE12Q6L8Q7 609 aaKnown RBP17.29■□□□□ 0.36
NPAS3-202ENST00000356141 RNF111Q6ZNA4 994 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 MILR1Q7Z6M3 343 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ADAMTSL2Q86TH1 951 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 FAM110BQ8TC76 370 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 MYADMQ96S97 322 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 EFCAB1Q9HAE3 211 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 TMEM165Q9HC07 324 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 NMRK1Q9NWW6 199 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 TMEM98Q9Y2Y6 226 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 V9GYQ6 96 aa17.29■□□□□ 0.36
NPAS3-202ENST00000356141 ARHGAP10A1A4S6 786 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 LOC730098B7Z3J9 87 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 SLC9A3R1O14745 358 aaPredicted RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 SYNCRIPO60506 623 aaKnown RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 ESRRBO95718 433 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 HMOX2P30519 316 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 GDI1P31150 447 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 DDX39BQ13838 428 aaKnown RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 PTK2BQ14289 1009 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 GAB4Q2WGN9 574 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 CAPRIN2Q6IMN6 1127 aaKnown RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 TLDC1Q6P9B6 456 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 KBTBD2Q8IY47 623 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 MED8Q96G25 268 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 P2RY13Q9BPV8 354 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 TRMOQ9BU70 441 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 OPTCQ9UBM4 332 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 EGFL7Q9UHF1 273 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 PDE10AQ9Y233 779 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 ANPEPP15144 967 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 VCLP18206 1134 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 BDKRB1P46663 353 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 TIGD2Q4W5G0 525 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 C2orf27AQ580R0 203 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 RAET1GQ6H3X3 334 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 LIPIQ6XZB0 460 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 NET1Q7Z628 596 aaPredicted RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 BHLHE22Q8NFJ8 381 aaPredicted RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 DNAJB14Q8TBM8 379 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 GFM2Q969S9 779 aaKnown RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 CEP44Q9C0F1 390 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 OR2AG1Q9H205 316 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 C1orf21Q9H246 121 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 USP22Q9UPT9 525 aa17.28■□□□□ 0.36
NPAS3-202ENST00000356141 CFAP20Q9Y6A4 193 aaKnown RBP17.28■□□□□ 0.36
NPAS3-202ENST00000356141 LZTS3O60299 673 aaPredicted RBP17.27■□□□□ 0.36
NPAS3-202ENST00000356141 SNRPB2P08579 225 aaKnown RBP17.27■□□□□ 0.36
NPAS3-202ENST00000356141 OR56A5P0C7T3 313 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 PSMA3P25788 255 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 PSME3P61289 254 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 BRAT1Q6PJG6 821 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 LRRC74BQ6ZQY2 392 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 SPATA24Q86W54 205 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 CHPFQ8IZ52 775 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 CPSF7Q8N684 471 aaKnown RBP17.27■□□□□ 0.36
NPAS3-202ENST00000356141 RASGEF1AQ8N9B8 481 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 FAR2Q96K12 515 aa17.27■□□□□ 0.36
NPAS3-202ENST00000356141 POLR3HQ9Y535 204 aaPredicted RBP17.27■□□□□ 0.36
NPAS3-202ENST00000356141 PCYT1BQ9Y5K3 369 aaPredicted RBP17.27■□□□□ 0.36
NPAS3-202ENST00000356141 DGKQP52824 942 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 FLOT2Q14254 428 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 SQLEQ14534 574 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 ZNF284Q2VY69 593 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 GPR33Q49SQ1 333 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 C9orf64Q5T6V5 341 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 METTL3Q86U44 580 aaKnown RBP17.27■□□□□ 0.35
NPAS3-202ENST00000356141 TRAPPC5Q8IUR0 188 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 SFRP1Q8N474 314 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 CDC26Q8NHZ8 85 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 ULK4Q96C45 1275 aa17.27■□□□□ 0.35
NPAS3-202ENST00000356141 SLC22A14Q9Y267 594 aa17.27■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms