RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 GPR142Q7Z601 462 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ALYREFQ86V81 257 aaKnown RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 RIOX2Q8IUF8 465 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 NXPE1Q8N323 547 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PLA2G15Q8NCC3 412 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 OR4K17Q8NGC6 315 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 TBC1D15Q8TC07 691 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 FCRL2Q96LA5 508 aaPredicted RBP17.04■□□□□ 0.32
COL27A1-201ENST00000356083 PRDM12Q9H4Q4 367 aa17.04■□□□□ 0.32
COL27A1-201ENST00000356083 ELOA3DA6NLF2 546 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-201ENST00000356083 PSKH1P11801 424 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ELOA3BQ3SY89 546 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 AHSA2Q719I0 299 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 VASH1Q7L8A9 365 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ELOA3Q8NG57 546 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF398Q8TD17 642 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 TRPS1Q9UHF7 1281 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 C2orf92A0A1B0GVN3 265 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 CASP6P55212 293 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 DLG4P78352 724 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 PIGZQ86VD9 579 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 COMTD1Q86VU5 262 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 TESMINQ9Y4I5 508 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 RTTNQ86VV8 2226 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 LDB2O43679 373 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 CLPXO76031 633 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 TM7SF2O76062 418 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 FLT3LGP49771 235 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 TXNDC11Q6PKC3 985 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 PKP4Q99569 1192 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 RAPGEFL1Q9UHV5 662 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ERVK-7P63135 1459 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 AZIN1O14977 448 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 SLURP2P0DP57 97 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ZNF143P52747 638 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-201ENST00000356083 METTL7AQ9H8H3 244 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 SIM2Q14190 667 aaPredicted RBP17.03■□□□□ 0.32
COL27A1-201ENST00000356083 SPPL2CQ8IUH8 684 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 KATNAL2Q8IYT4 538 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 SMARCD2Q92925 531 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 RFKQ969G6 155 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 SIGLEC16A6NMB1 481 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 C9JVG2 144 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 TPPPO94811 219 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 PAEPP09466 180 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ATP5A1P25705 553 aaKnown RBP17.03■□□□□ 0.32
COL27A1-201ENST00000356083 TNFSF9P41273 254 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 PDK3Q15120 406 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 ANO7Q6IWH7 933 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 OTOP1Q7RTM1 612 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 LRRC20Q8TCA0 184 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 CHST7Q9NS84 486 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 PCDHAC2Q9Y5I4 1007 aa17.03■□□□□ 0.32
COL27A1-201ENST00000356083 SPHKAPQ2M3C7 1700 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 APOC4-APOC2K7ER74 178 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 APOC2P02655 101 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 PAX3P23760 479 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 NRLP54845 237 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 MFHAS1Q9Y4C4 1052 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 GNB3P16520 340 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 DLG3Q92796 817 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 ABCA8O94911 1581 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 hCG_2039718K7EN88 272 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 MAGEA11P43364 429 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 ZYG11AQ6WRX3 759 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 FZD3Q9NPG1 666 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 RAI2Q9Y5P3 530 aa17.02■□□□□ 0.32
COL27A1-201ENST00000356083 RIMS1Q86UR5 1692 aaKnown RBP17.02■□□□□ 0.32
COL27A1-201ENST00000356083 IFI30P13284 250 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 BLKP51451 505 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 ENPP2Q13822 863 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 WASHC2DQ5SRD0 308 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 ZNF34Q8IZ26 560 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 IL22RA1Q8N6P7 574 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 NINJ1Q92982 152 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 SP140LQ9H930 580 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 ALG5Q9Y673 324 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 CAMSAP1Q5T5Y3 1602 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 E7ENX8 843 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 PPEF2O14830 753 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 BCKDKO14874 412 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 CHADO15335 359 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 CD40LGP29965 261 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 RFTN2Q52LD8 501 aaPredicted RBP17.02■□□□□ 0.31
COL27A1-201ENST00000356083 MED27Q6P2C8 311 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 DPY19L4Q7Z388 723 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 TMED4Q7Z7H5 227 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 SLC16A10Q8TF71 515 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 CYB5D2Q8WUJ1 264 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 GOLGA2P5Q9HBQ8 144 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 DNAAF2Q9NVR5 837 aaKnown RBP17.02■□□□□ 0.31
COL27A1-201ENST00000356083 LYARQ9NX58 379 aaKnown RBP17.02■□□□□ 0.31
COL27A1-201ENST00000356083 PRMT5O14744 637 aaPredicted RBP17.02■□□□□ 0.31
COL27A1-201ENST00000356083 ST3GAL1Q11201 340 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 ARHGAP40Q5TG30 622 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 GK5Q6ZS86 529 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 TBC1D14Q9P2M4 693 aa17.02■□□□□ 0.31
COL27A1-201ENST00000356083 CNTNAP1P78357 1384 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 A0A0J9YVX5 310 aa17.01■□□□□ 0.31
COL27A1-201ENST00000356083 LSM1O15116 133 aaKnown RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms