RNA–Protein interactions for RNA: ENST00000354497.4

RTN3-204, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-204ENST00000354497 SLC25A14O95258 325 aaPredicted RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 SLC4A1P02730 911 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 ALPPP05187 535 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 VIMP08670 466 aaKnown RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 ZNF7P17097 686 aaPredicted RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 AMPD1P23109 780 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 IL4RP24394 825 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 CLCNKAP51800 687 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 CDH6P55285 790 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 DSC2Q02487 901 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 DPYSQ14117 519 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 KBTBD12Q3ZCT8 623 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 HENMT1Q5T8I9 393 aaKnown RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 BZW1Q7L1Q6 419 aaKnown RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 LRRTM4Q86VH4 590 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 BPHLQ86WA6 291 aaPredicted RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 RAB43Q86YS6 212 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 ZBTB2Q8N680 514 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 ZNF653Q96CK0 615 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 PCMTD1Q96MG8 357 aaPredicted RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 SLC7A5P2Q9GIP4 190 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 POLR1EQ9GZS1 481 aaKnown RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 MMADHCQ9H3L0 296 aaPredicted RBP10.94□□□□□ -0.66
RTN3-204ENST00000354497 SLC40A1Q9NP59 571 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 ETNK2Q9NVF9 386 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 ANO10Q9NW15 660 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 SOHLH2Q9NX45 425 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 C5AR2Q9P296 337 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 EPHA6Q9UF33 1036 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 NTNG1Q9Y2I2 539 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 ADGRG1Q9Y653 693 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 HIVEP3Q5T1R4 2406 aa10.94□□□□□ -0.66
RTN3-204ENST00000354497 GOLGA8KD6RF30 607 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 MEN1O00255 615 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 KMOO15229 486 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 MTX2O75431 263 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 JCHAINP01591 159 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 SNRPB2P08579 225 aaKnown RBP10.93□□□□□ -0.66
RTN3-204ENST00000354497 RAB40ALP0C0E4 278 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 BRAFP15056 766 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 ZNF24P17028 368 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 IDSP22304 550 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 FECHP22830 423 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 MIPP30301 263 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 ARL4AP40617 200 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 HALP42357 657 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 SPINT3P49223 89 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 PSMD7P51665 324 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 SESN3P58005 492 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 HSD11B2P80365 405 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 LLGL1Q15334 1064 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 TMTC4Q5T4D3 741 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 PRAMEF17Q5VTA0 474 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 KLHL35Q6PF15 583 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 C6orf89Q6UWU4 347 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 ADGRG6Q86SQ4 1221 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 ZADH2Q8N4Q0 377 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 SLC38A9Q8NBW4 561 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 ST6GALNAC3Q8NDV1 305 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 BCAS4Q8TDM0 211 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 CPT1BQ92523 772 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 INPP5DQ92835 1189 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 CAPS2Q9BXY5 557 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 DTLQ9NZJ0 730 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 TMCO1Q9UM00 188 aa10.93□□□□□ -0.66
RTN3-204ENST00000354497 MYO1FO00160 1098 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 EPHB6O15197 1021 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 DNAJC8O75937 253 aaPredicted RBP10.92□□□□□ -0.66
RTN3-204ENST00000354497 CA4P22748 312 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TRPC1P48995 793 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 JAM2P57087 298 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 SNX1Q13596 522 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 WHAMMP3Q1A5X7 153 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ANKRD20A8PQ5CZ79 823 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 GDF7Q7Z4P5 450 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 FJX1Q86VR8 437 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 MCOLN2Q8IZK6 566 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 DSELQ8IZU8 1212 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 MLKLQ8NB16 471 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 CLEC1AQ8NC01 280 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 GPR150Q8NGU9 434 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TM9SF4Q92544 642 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 HSPH1Q92598 858 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 ZNF501Q96CX3 271 aaPredicted RBP10.92□□□□□ -0.66
RTN3-204ENST00000354497 LURAP1Q96LR2 239 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 AGPAT1Q99943 283 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TDRD1Q9BXT4 1180 aaKnown RBP10.92□□□□□ -0.66
RTN3-204ENST00000354497 NLNQ9BYT8 704 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 RAB33BQ9H082 229 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 FANCEQ9HB96 536 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 PCDH9Q9HC56 1237 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TRIM39Q9HCM9 518 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 SPATA7Q9P0W8 599 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 COPG2Q9UBF2 871 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 CTNNAL1Q9UBT7 734 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 CDC23Q9UJX2 597 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 HEATR9A2RTY3 570 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 TLCD2A6NGC4 264 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 DIAPH2O60879 1101 aa10.92□□□□□ -0.66
RTN3-204ENST00000354497 VCLP18206 1134 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms