RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 KRTAP10-9P60411 292 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 RPL26P61254 145 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 ADCY2Q08462 1091 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 DPYSL3Q14195 570 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 PAFAH1B3Q15102 231 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 SLC18A3Q16572 532 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 ZNF630Q2M218 657 aaPredicted RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 KHDC1Q4VXA5 237 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 TIGD7Q6NT04 549 aaPredicted RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 ZNF295-AS1Q8N0V1 137 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 TRAM1L1Q8N609 369 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 OR8K1Q8NGG5 319 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 EID2BQ96D98 161 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 ZFYVE1Q9HBF4 777 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 IMP3Q9NV31 184 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 ZNHIT6Q9NWK9 470 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 SUCOQ9UBS9 1254 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 GPN3Q9UHW5 284 aaPredicted RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 SERTAD3Q9UJW9 196 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 NENFQ9UMX5 172 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 RPL26L1Q9UNX3 145 aaKnown RBP15.41■□□□□ 0.06
DDX55-202ENST00000354291 SHOC2Q9UQ13 582 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 BTRCQ9Y297 605 aa15.41■□□□□ 0.06
DDX55-202ENST00000354291 A0A1B0GTL3 188 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 ANKRD66B4E2M5 251 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 MATN3O15232 486 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 CDH3P22223 829 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 CCNCP24863 283 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 FOLR3P41439 243 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 TSFMP43897 325 aaKnown RBP15.4■□□□□ 0.06
DDX55-202ENST00000354291 NIPAL4Q0D2K0 466 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 GALNT2Q10471 571 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 GTF2H3Q13889 308 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 ZNF169Q14929 603 aaPredicted RBP15.4■□□□□ 0.06
DDX55-202ENST00000354291 IFI16Q16666 785 aaKnown RBP15.4■□□□□ 0.06
DDX55-202ENST00000354291 ATP13A4Q4VNC1 1196 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 FAM180AQ6UWF9 173 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 BNC2Q6ZN30 1099 aaPredicted RBP15.4■□□□□ 0.06
DDX55-202ENST00000354291 B4GALNT4Q76KP1 1039 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 C11orf96Q7Z7L8 435 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 GDAP1Q8TB36 358 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 PPP4R1Q8TF05 950 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 FATE1Q969F0 183 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 DNAJC7Q99615 494 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 DPH2Q9BQC3 489 aaPredicted RBP15.4■□□□□ 0.06
DDX55-202ENST00000354291 ZNF670Q9BS34 389 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 DHRS4Q9BTZ2 278 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 DEF6Q9H4E7 631 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 OLAHQ9NV23 265 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 AMACRQ9UHK6 382 aa15.4■□□□□ 0.06
DDX55-202ENST00000354291 MAP1AP78559 2803 aaPredicted RBP15.39■□□□□ 0.05
DDX55-202ENST00000354291 TRGV8A0A0C4DH27 118 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 ZNF749O43361 778 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 MFSD11O43934 449 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 NADKO95544 446 aaPredicted RBP15.39■□□□□ 0.05
DDX55-202ENST00000354291 TPM1P09493 284 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 PIRTP0C851 137 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 POLR2CP19387 275 aaPredicted RBP15.39■□□□□ 0.05
DDX55-202ENST00000354291 SSTR2P30874 369 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 GJC1P36383 396 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 SOX8P57073 446 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 FOXL2P58012 376 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 TMEM115Q12893 351 aaPredicted RBP15.39■□□□□ 0.05
DDX55-202ENST00000354291 XRCC4Q13426 336 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 GALNT3Q14435 633 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 CYP2A13Q16696 494 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 ZNF789Q5FWF6 425 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 NCBP2-AS2Q69YL0 99 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 CDH24Q86UP0 819 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 AMZ2Q86W34 360 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 ARRDC2Q8TBH0 407 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 TTC25Q96NG3 672 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 TSGA13Q96PP4 275 aa15.39■□□□□ 0.05
DDX55-202ENST00000354291 E7EQ34 232 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 CCL21O00585 134 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 AKR1B10O60218 316 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 POP7O75817 140 aaKnown RBP15.38■□□□□ 0.05
DDX55-202ENST00000354291 CBSLP0DN79 551 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 MX2P20592 715 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 CBSP35520 551 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 ASTE1Q2TB18 679 aaPredicted RBP15.38■□□□□ 0.05
DDX55-202ENST00000354291 ZFYVE27Q5T4F4 411 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 C1orf189Q5VU69 101 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 PDPK2PQ6A1A2 396 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 ALG1LQ6GMV1 187 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 FAM83HQ6ZRV2 1179 aaPredicted RBP15.38■□□□□ 0.05
DDX55-202ENST00000354291 ZNF808Q8N4W9 903 aaPredicted RBP15.38■□□□□ 0.05
DDX55-202ENST00000354291 BCORP1Q8N888 145 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 MAML1Q92585 1016 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 CCDC120Q96HB5 630 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 SLX1AQ9BQ83 275 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 ADGRE3Q9BY15 652 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 RAD18Q9NS91 495 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 FBN3Q75N90 2809 aa15.38■□□□□ 0.05
DDX55-202ENST00000354291 CCDC78A2IDD5 438 aa15.37■□□□□ 0.05
DDX55-202ENST00000354291 MAP3K7O43318 606 aa15.37■□□□□ 0.05
DDX55-202ENST00000354291 ALOX12BO75342 701 aa15.37■□□□□ 0.05
DDX55-202ENST00000354291 HBQ1P09105 142 aa15.37■□□□□ 0.05
DDX55-202ENST00000354291 TMEM253P0C7T8 217 aa15.37■□□□□ 0.05
DDX55-202ENST00000354291 MTHFD1P11586 935 aaKnown RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms