RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 MRPS33Q9Y291 106 aaKnown RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 PTPRZ1P23471 2315 aaPredicted RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 A0A1B0GUL6 1792 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 RGS5O15539 181 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 FAM20BO75063 409 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 TULP3O75386 442 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 KRT75O95678 551 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 FYNP06241 537 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 ANXA6P08133 673 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 RUNX1T1Q06455 604 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 ZNF542PQ5EBM4 170 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 KIAA0319Q5VV43 1072 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 FAAH2Q6GMR7 532 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 ARFGAP1Q8N6T3 406 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 SAMD11Q96NU1 681 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 ANGPT4Q9Y264 503 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 A8MU76 341 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 K7EPI3 171 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 CCNDBP1O95273 360 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 SLC35G6P0C7Q6 338 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 PRSS56P0CW18 603 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 NEDD8Q15843 81 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 TCEAL8Q8IYN2 117 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 PLD6Q8N2A8 252 aaKnown RBP13.48□□□□□ -0.25
SMC6-201ENST00000351948 TSGA13Q96PP4 275 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 FZD3Q9NPG1 666 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 EVA1BQ9NVM1 165 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 TAC3Q9UHF0 121 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 LRP5O75197 1615 aa13.48□□□□□ -0.25
SMC6-201ENST00000351948 TCRBV21S2A2A0A5A6 115 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 MAGEA13PA6NCF6 341 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 CD72P21854 359 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 TCEA1P23193 301 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 RPL3P39023 403 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 ZFP1Q6P2D0 407 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 CHRDL2Q6WN34 429 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 SPPL2CQ8IUH8 684 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 DHRSXQ8N5I4 330 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 CHST14Q8NCH0 376 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 OR4E2Q8NGC2 313 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 TFGQ92734 400 aaPredicted RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 TOX2Q96NM4 488 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 KIFC1Q9BW19 673 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 INTS7Q9NVH2 962 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 A0A0J9YVX5 310 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 CEBPBP17676 345 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 NELFEP18615 380 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 MRPS35P82673 323 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 TNK2Q07912 1038 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 SLBPQ14493 270 aaKnown RBP eCLIP13.47□□□□□ -0.25
SMC6-201ENST00000351948 TEAD4Q15561 434 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 FAM174BQ3ZCQ3 159 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 EOGTQ5NDL2 527 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 BHLHB9Q6PI77 547 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 REXO5Q96IC2 774 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 CCM2Q9BSQ5 444 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 TFB2MQ9H5Q4 396 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 MRPS30Q9NP92 439 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 SIPA1L3O60292 1781 aaPredicted RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 RB1P06400 928 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 TYRP1P17643 537 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 MOGSQ13724 837 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 RUNX3Q13761 415 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 TXNDC5Q8NBS9 432 aaKnown RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 BTBD9Q96Q07 612 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 RNF38Q9H0F5 515 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 RNPEPL1Q9HAU8 725 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 SH3GLB1Q9Y371 365 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 HCFC2Q9Y5Z7 792 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 LINC00854A0A1B0GVQ3 168 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 CST1P01037 141 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 GBAP04062 536 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 PM20D1Q6GTS8 502 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 ZNF514Q96K75 400 aaPredicted RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 MARCH4Q9P2E8 410 aaPredicted RBP13.47□□□□□ -0.25
SMC6-201ENST00000351948 GIMAP2Q9UG22 337 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 AK5Q9Y6K8 562 aa13.47□□□□□ -0.25
SMC6-201ENST00000351948 DHRS12A0PJE2 317 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 PI15O43692 258 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 SNUPNO95149 360 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 ITPKBP27987 946 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ARSDP51689 593 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ERVFC1P60507 584 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 HERVK_113P63132 956 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 NFKB2Q00653 900 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 RALGPS1Q5JS13 557 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ANXA8L1Q5VT79 327 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 RINLQ6ZS11 566 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 SPATA19Q7Z5L4 167 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 TSPAN33Q86UF1 283 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ADHFE1Q8IWW8 467 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 OTUB2Q96DC9 234 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 ERVK-6Q9BXR3 956 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 TPSD1Q9BZJ3 242 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 WDR6Q9NNW5 1121 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 GTPBP1O00178 669 aaKnown RBP13.46□□□□□ -0.25
SMC6-201ENST00000351948 TIPRLO75663 272 aa13.46□□□□□ -0.25
SMC6-201ENST00000351948 CYP4B1P13584 511 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms