RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 PHYKPLQ8IUZ5 450 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 SVOPLQ8N434 492 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 ANKRD53Q8N9V6 530 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 SETD9Q8NE22 299 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 KBTBD8Q8NFY9 601 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 LRRC3Q9BY71 257 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 ACAD9Q9H845 621 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 CYP3A43Q9HB55 503 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 CASS4Q9NQ75 786 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 PDLIM7Q9NR12 457 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 UBP1Q9NZI7 540 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.05□□□□□ -0.32
IFT88-202ENST00000351808 NRCAMQ92823 1304 aa13.05□□□□□ -0.32
IFT88-202ENST00000351808 A0A1W2PQ09 198 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 ATG13O75143 517 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 SERPINF2P08697 491 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 PIK3CBP42338 1070 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 JAK3P52333 1124 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 SH3BP2P78314 561 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 EMX2Q04743 252 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 TIGD6Q17RP2 521 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 ARMCX4Q5H9R4 360 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 COQ5Q5HYK3 327 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 SCUBE3Q8IX30 993 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 OR8H3Q8N146 312 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 CYP4Z2PQ8N1L4 340 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 CERS5Q8N5B7 392 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 ZBTB44Q8NCP5 570 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 PPM1MQ96MI6 270 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 KCNA7Q96RP8 456 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 DNAJC5Q9H3Z4 198 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 FAM83DQ9H4H8 585 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 TNFRSF10DQ9UBN6 386 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 LIMD1Q9UGP4 676 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 DIMT1Q9UNQ2 313 aaKnown RBP13.04□□□□□ -0.32
IFT88-202ENST00000351808 A0A096LPI6 279 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 LINC00862A6NCI5 91 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 H0YCG3 227 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 TNNC2P02585 160 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 RPLP0P05388 317 aaKnown RBP13.04□□□□□ -0.32
IFT88-202ENST00000351808 LBPP18428 481 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 ATF6P18850 670 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 C21orf33P30042 268 aaPredicted RBP13.04□□□□□ -0.32
IFT88-202ENST00000351808 KRT20P35900 424 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 GLUD2P49448 558 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 PLIN5Q00G26 463 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 MXD4Q14582 209 aaPredicted RBP13.04□□□□□ -0.32
IFT88-202ENST00000351808 MTERF2Q49AM1 385 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 ATF7IP2Q5U623 682 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 ST13P5Q8NFI4 369 aaPredicted RBP13.04□□□□□ -0.32
IFT88-202ENST00000351808 TWIST2Q8WVJ9 160 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 AKT1S1Q96B36 256 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 FRMD6Q96NE9 622 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 CCSER2Q9H7U1 834 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 CPNE7Q9UBL6 633 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 SCML1Q9UN30 329 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 PKP3Q9Y446 797 aa13.04□□□□□ -0.32
IFT88-202ENST00000351808 B4DXG7 233 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 STX7O15400 261 aaKnown RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 PI15O43692 258 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 SLC22A5O76082 557 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 C1QBP02746 253 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 UFM1P61960 85 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 UBE3AQ05086 875 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TP53BP2Q13625 1128 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 DDR2Q16832 855 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 BRAT1Q6PJG6 821 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 XKRXQ6PP77 449 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 PRSS42Q7Z5A4 293 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 PCNPQ8WW12 178 aaKnown RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 CLEC4DQ8WXI8 215 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 KHSRPQ92945 711 aaKnown RBP eCLIP13.03□□□□□ -0.32
IFT88-202ENST00000351808 PTERQ96BW5 349 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 CCDC126Q96EE4 140 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 MASTLQ96GX5 879 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TBATAQ96M53 351 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 ACTR8Q9H981 624 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 FARSBQ9NSD9 589 aaKnown RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 TRAPPC4Q9Y296 219 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 BTN3A3O00478 584 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 STBD1O95210 358 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 CXCR4P61073 352 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 HOXC5Q00444 222 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 HYAL2Q12891 473 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 ZBTB37Q5TC79 503 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 APOBEC3HQ6NTF7 200 aaKnown RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 SWSAP1Q6NVH7 229 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TMC8Q8IU68 726 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 LURAP1LQ8IV03 231 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 OR5K1Q8NHB7 308 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 SLC47A1Q96FL8 570 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TMEM176AQ96HP8 235 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 B3GNT5Q9BYG0 378 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 TUBB1Q9H4B7 451 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 NIPAL2Q9H841 368 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 GBA2Q9HCG7 927 aaPredicted RBP13.03□□□□□ -0.32
IFT88-202ENST00000351808 CCNB1IP1Q9NPC3 277 aa13.03□□□□□ -0.32
IFT88-202ENST00000351808 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms