RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 SPATS1Q496A3 300 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF621Q6ZSS3 439 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 OR14C36Q8NHC7 312 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 GDPD5Q8WTR4 605 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 MPC1LP0DKB6 136 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 IL12RB1P42701 662 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 VAC14Q08AM6 782 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 AP5B1Q2VPB7 878 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 Q6ZVU0 165 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 NXPE1Q8N323 547 aa11.98□□□□□ -0.49
SMAD9-201ENST00000350148 LILRB3O75022 631 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 PEX14O75381 377 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 MTX3Q5HYI7 312 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 LHX8Q68G74 356 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 GPR141Q7Z602 305 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CBARPQ8N350 705 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TRAM1L1Q8N609 369 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 HERVK_113Q902F9 699 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 FIG4Q92562 907 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 WRAP53Q9BUR4 548 aaKnown RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 PAIP1Q9H074 479 aaKnown RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ELOVL2Q9NXB9 296 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CCT3P49368 545 aaKnown RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ATP4BP51164 291 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 POLR2JP52435 117 aaKnown RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 SPIDRQ14159 915 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 RAB6CQ53S08 254 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TTC33Q6PID6 262 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 P3H2Q8IVL5 708 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 HDDC3Q8N4P3 179 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 DEPDC7Q96QD5 511 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 RAB6CQ9H0N0 254 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ZNF682O95780 498 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ALDH9A1P49189 494 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 IRF9Q00978 393 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 KIAA0319Q5VV43 1072 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TMEM26Q6ZUK4 368 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 DHDDSQ86SQ9 333 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ARHGAP12Q8IWW6 846 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TMEM130Q8N3G9 435 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 BHLHE22Q8NFJ8 381 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 FCRL3Q96P31 734 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 WDR55Q9H6Y2 383 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 GALNT8Q9NY28 637 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ANGPT4Q9Y264 503 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 WDR37Q9Y2I8 494 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 DHRS7Q9Y394 339 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TNFRSF10BO14763 440 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 KRT36O76013 467 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 PDE9AO76083 593 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 HSPA7P48741 367 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 KDELC1Q6UW63 502 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 AMZ2Q86W34 360 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TRIM69Q86WT6 500 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 MRPL43Q8N983 215 aaKnown RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 SETD9Q8NE22 299 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TTLQ8NG68 377 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 EFCAB11Q9BUY7 163 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ADNPQ9H2P0 1102 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CWH43Q9H720 699 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 GDE1Q9NZC3 331 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 LIMD1Q9UGP4 676 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CAPN8A6NHC0 703 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 DLX3O60479 287 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ECI2O75521 394 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ALPIP09923 528 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 GNAZP19086 355 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CMPK1P30085 196 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CD68P34810 354 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 LRRC66Q68CR7 880 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TRNP1Q6NT89 227 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 TRIM40Q6P9F5 258 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 CFAP206Q8IYR0 622 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 DHRS4Q9BTZ2 278 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 RIOK2Q9BVS4 552 aaKnown RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ROGDIQ9GZN7 287 aa11.97□□□□□ -0.49
SMAD9-201ENST00000350148 PAK6Q9NQU5 681 aaPredicted RBP11.97□□□□□ -0.49
SMAD9-201ENST00000350148 ABLIM3O94929 683 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 PENKP01210 267 aaPredicted RBP11.96□□□□□ -0.49
SMAD9-201ENST00000350148 PCCBP05166 539 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 UMPSP11172 480 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 TSPAN8P19075 237 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 BLKP51451 505 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 NAE1Q13564 534 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 MRPL58Q14197 206 aaKnown RBP11.96□□□□□ -0.49
SMAD9-201ENST00000350148 CACUL1Q86Y37 369 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 RERGQ96A58 199 aaPredicted RBP11.96□□□□□ -0.49
SMAD9-201ENST00000350148 MTFMTQ96DP5 389 aaKnown RBP11.96□□□□□ -0.49
SMAD9-201ENST00000350148 SHDQ96IW2 340 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 PLEKHA8Q96JA3 519 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 TRAPPC9Q96Q05 1148 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 RTP3Q9BQQ7 232 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 SLC32A1Q9H598 525 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 RUVBL1Q9Y265 456 aaKnown RBP11.96□□□□□ -0.49
SMAD9-201ENST00000350148 POLR3HQ9Y535 204 aaPredicted RBP11.96□□□□□ -0.49
SMAD9-201ENST00000350148 CLDN7O95471 211 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 IL6P05231 212 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 ITGA2P17301 1181 aa11.96□□□□□ -0.49
SMAD9-201ENST00000350148 HOXA9P31269 272 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms