RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 OR10Q1Q8NGQ4 319 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 KCNJ9Q92806 393 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 CFHR5Q9BXR6 569 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 FAM126AQ9BYI3 521 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 OPTCQ9UBM4 332 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 GNPTGQ9UJJ9 305 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 H3BNX3 289 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 TRIM38O00635 465 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 SEC22BO75396 215 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 ARHGEF15O94989 841 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 POLR2EP19388 210 aaKnown RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 LBX1P52954 281 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 MTPNP58546 118 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 HPCAP84074 193 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PPP1R8Q12972 351 aaKnown RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 MTA1Q13330 715 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 FAM109BQ6ICB4 259 aaPredicted RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 Q6ZNB5 142 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 SNX20Q7Z614 316 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 SFTPA1Q8IWL2 248 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 ITFG1Q8TB96 612 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 CANT1Q8WVQ1 401 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 FATE1Q969F0 183 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 MED8Q96G25 268 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 MAGEE1Q9HCI5 957 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 INTS7Q9NVH2 962 aaKnown RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 ELOVL2Q9NXB9 296 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 HSFX1Q9UBD0 423 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 KANSL1LA0AUZ9 987 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 CCDC154A6NI56 674 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 FAM58BPP0C7Q3 252 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 G6PDP11413 515 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PRDX6P30041 224 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 NNMTP40261 264 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PREPP48147 710 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 MAPK10P53779 464 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 C16orf72Q14CZ0 275 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 ACOX1Q15067 660 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PAGE3Q5JUK9 113 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 ALG1LQ6GMV1 187 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 KBTBD6Q86V97 674 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 CPSF7Q8N684 471 aaKnown RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 JADE3Q92613 823 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 MAELQ96JY0 434 aaKnown RBP13.66□□□□□ -0.22
TRIM4-201ENST00000349062 DOLKQ9UPQ8 538 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 DHRS7Q9Y394 339 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PRKAB1Q9Y478 270 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 PLXNA3P51805 1871 aa13.66□□□□□ -0.22
TRIM4-201ENST00000349062 A0A0J9YVX5 310 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 LOC730098B7Z3J9 87 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 PDLIM1O00151 329 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 ESRRBO95718 433 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 CDH15P55291 814 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 DHFR2Q86XF0 187 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 VRK3Q8IV63 474 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 RHEBL1Q8TAI7 183 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 ELMO1Q92556 727 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 IRF7Q92985 503 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 FAM210AQ96ND0 272 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 PRPF19Q9UMS4 504 aaKnown RBP13.65□□□□□ -0.22
TRIM4-201ENST00000349062 E2F3O00716 465 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 ZNF821O75541 412 aaPredicted RBP13.65□□□□□ -0.22
TRIM4-201ENST00000349062 TFPTP0C1Z6 253 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 GPX3P22352 226 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 PPP3CCP48454 512 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 RPIAP49247 311 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 RFTN2Q52LD8 501 aaPredicted RBP13.65□□□□□ -0.22
TRIM4-201ENST00000349062 ARHGAP15Q53QZ3 475 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 FIBINQ8TAL6 211 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 THEGQ9P2T0 379 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 INSL6Q9Y581 213 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 AP4S1Q9Y587 144 aa13.65□□□□□ -0.22
TRIM4-201ENST00000349062 B3GALT4O96024 378 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 STT3AP46977 705 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 PTSQ03393 145 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 LRP8Q14114 963 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 TRIM25Q14258 630 aaKnown RBP13.65□□□□□ -0.23
TRIM4-201ENST00000349062 NUMA1Q14980 2115 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 HTR3DQ70Z44 454 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 STK40Q8N2I9 435 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 NXPE1Q8N323 547 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 TSSK3Q96PN8 268 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 RIOK2Q9BVS4 552 aaKnown RBP13.65□□□□□ -0.23
TRIM4-201ENST00000349062 ZNF385DQ9H6B1 395 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 PTTG2Q9NZH5 202 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 PSMD13Q9UNM6 376 aa13.65□□□□□ -0.23
TRIM4-201ENST00000349062 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.64□□□□□ -0.23
TRIM4-201ENST00000349062 GAPDHSO14556 408 aaPredicted RBP13.64□□□□□ -0.23
TRIM4-201ENST00000349062 FZD6O60353 706 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 TRMUO75648 421 aaKnown RBP13.64□□□□□ -0.23
TRIM4-201ENST00000349062 SLC22A3O75751 556 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 TNFAIP8O95379 198 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 CDK4P11802 303 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 CEBPBP17676 345 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 DGKAP23743 735 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 ACRV1P26436 265 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 HALP42357 657 aa13.64□□□□□ -0.23
TRIM4-201ENST00000349062 CDKL1Q00532 357 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms