RNA–Protein interactions for RNA: ENST00000348990.9

APP-202, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 3,355 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-202ENST00000348990 TREHO43280 583 aa17.54■□□□□ 0.4
APP-202ENST00000348990 SMPD1P17405 629 aa17.54■□□□□ 0.4
APP-202ENST00000348990 MSH3P20585 1137 aa17.54■□□□□ 0.4
APP-202ENST00000348990 CLCA4Q14CN2 919 aa17.54■□□□□ 0.4
APP-202ENST00000348990 RFTN2Q52LD8 501 aaPredicted RBP17.54■□□□□ 0.4
APP-202ENST00000348990 ALFQ53S48 1182 aa17.54■□□□□ 0.4
APP-202ENST00000348990 RAB41Q5JT25 222 aa17.54■□□□□ 0.4
APP-202ENST00000348990 BEND5Q7L4P6 421 aa17.54■□□□□ 0.4
APP-202ENST00000348990 ANKRD46Q86W74 232 aa17.54■□□□□ 0.4
APP-202ENST00000348990 ATG16L2Q8NAA4 619 aa17.54■□□□□ 0.4
APP-202ENST00000348990 MTFMTQ96DP5 389 aaKnown RBP17.54■□□□□ 0.4
APP-202ENST00000348990 RPRD1AQ96P16 312 aaPredicted RBP17.54■□□□□ 0.4
APP-202ENST00000348990 ABCG8Q9H221 673 aa17.54■□□□□ 0.4
APP-202ENST00000348990 DSN1Q9H410 356 aa17.54■□□□□ 0.4
APP-202ENST00000348990 BPIFA1Q9NP55 256 aa17.54■□□□□ 0.4
APP-202ENST00000348990 ABCC13Q9NSE7 274 aa17.54■□□□□ 0.4
APP-202ENST00000348990 SMPD4Q9NXE4 827 aa17.54■□□□□ 0.4
APP-202ENST00000348990 SLCO3A1Q9UIG8 710 aa17.54■□□□□ 0.4
APP-202ENST00000348990 ZNF225Q9UK10 706 aa17.54■□□□□ 0.4
APP-202ENST00000348990 EFCAB9A8MZ26 197 aa17.54■□□□□ 0.4
APP-202ENST00000348990 VPS26AO75436 327 aa17.54■□□□□ 0.4
APP-202ENST00000348990 PAPSS2O95340 614 aaPredicted RBP17.54■□□□□ 0.4
APP-202ENST00000348990 CD40LGP29965 261 aa17.54■□□□□ 0.4
APP-202ENST00000348990 ALDH7A1P49419 539 aaKnown RBP17.54■□□□□ 0.4
APP-202ENST00000348990 CDKN1CP49918 316 aaPredicted RBP17.54■□□□□ 0.4
APP-202ENST00000348990 GABARAPL2P60520 117 aa17.54■□□□□ 0.4
APP-202ENST00000348990 MRPS15P82914 257 aaKnown RBP17.54■□□□□ 0.4
APP-202ENST00000348990 BRMS1LQ5PSV4 323 aa17.54■□□□□ 0.4
APP-202ENST00000348990 Q6ZSR9 355 aa17.54■□□□□ 0.4
APP-202ENST00000348990 SVOPLQ8N434 492 aa17.54■□□□□ 0.4
APP-202ENST00000348990 C3orf58Q8NDZ4 430 aa17.54■□□□□ 0.4
APP-202ENST00000348990 EEF1AKMT1Q8WVE0 214 aa17.54■□□□□ 0.4
APP-202ENST00000348990 EGFL8Q99944 293 aa17.54■□□□□ 0.4
APP-202ENST00000348990 MAGEE1Q9HCI5 957 aa17.54■□□□□ 0.4
APP-202ENST00000348990 HHLA1C9JL84 531 aa17.54■□□□□ 0.4
APP-202ENST00000348990 POMCP01189 267 aa17.54■□□□□ 0.4
APP-202ENST00000348990 CTSHP09668 335 aa17.54■□□□□ 0.4
APP-202ENST00000348990 MYCLP1P12525 358 aaPredicted RBP17.54■□□□□ 0.4
APP-202ENST00000348990 ERVPABLB-1P60509 514 aa17.54■□□□□ 0.4
APP-202ENST00000348990 HMGCS1Q01581 520 aa17.54■□□□□ 0.4
APP-202ENST00000348990 EFEMP1Q12805 493 aa17.54■□□□□ 0.4
APP-202ENST00000348990 DCP2Q8IU60 420 aaKnown RBP17.54■□□□□ 0.4
APP-202ENST00000348990 OR5K1Q8NHB7 308 aa17.54■□□□□ 0.4
APP-202ENST00000348990 SLC13A3Q8WWT9 602 aa17.54■□□□□ 0.4
APP-202ENST00000348990 SMIM14Q96QK8 99 aa17.54■□□□□ 0.4
APP-202ENST00000348990 NUSAP1Q9BXS6 441 aaKnown RBP17.54■□□□□ 0.4
APP-202ENST00000348990 ARNT2Q9HBZ2 717 aa17.54■□□□□ 0.4
APP-202ENST00000348990 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.54■□□□□ 0.4
APP-202ENST00000348990 PCTPQ9UKL6 214 aa17.54■□□□□ 0.4
APP-202ENST00000348990 RGS10O43665 173 aa17.53■□□□□ 0.4
APP-202ENST00000348990 FKBP9O95302 570 aa17.53■□□□□ 0.4
APP-202ENST00000348990 HPRP00739 348 aa17.53■□□□□ 0.4
APP-202ENST00000348990 LCKP06239 509 aa17.53■□□□□ 0.4
APP-202ENST00000348990 S100A5P33763 92 aa17.53■□□□□ 0.4
APP-202ENST00000348990 STC1P52823 247 aa17.53■□□□□ 0.4
APP-202ENST00000348990 IHHQ14623 411 aa17.53■□□□□ 0.4
APP-202ENST00000348990 TIGD5Q53EQ6 642 aa17.53■□□□□ 0.4
APP-202ENST00000348990 UBXN11Q5T124 520 aa17.53■□□□□ 0.4
APP-202ENST00000348990 FKBP9P1Q75LS8 142 aa17.53■□□□□ 0.4
APP-202ENST00000348990 BHLHA9Q7RTU4 235 aa17.53■□□□□ 0.4
APP-202ENST00000348990 MFSD4AQ8N468 514 aa17.53■□□□□ 0.4
APP-202ENST00000348990 PIK3C3Q8NEB9 887 aa17.53■□□□□ 0.4
APP-202ENST00000348990 CDKN2AIPNLQ96HQ2 116 aa17.53■□□□□ 0.4
APP-202ENST00000348990 ZNF641Q96N77 438 aaPredicted RBP17.53■□□□□ 0.4
APP-202ENST00000348990 APOL5Q9BWW9 433 aa17.53■□□□□ 0.4
APP-202ENST00000348990 DCSTAMPQ9H295 470 aa17.53■□□□□ 0.4
APP-202ENST00000348990 TMLHEQ9NVH6 421 aa17.53■□□□□ 0.4
APP-202ENST00000348990 PCDHB14Q9Y5E9 798 aa17.53■□□□□ 0.4
APP-202ENST00000348990 IQCF5A8MTL0 148 aa17.53■□□□□ 0.4
APP-202ENST00000348990 RECQL5O94762 991 aaPredicted RBP17.53■□□□□ 0.4
APP-202ENST00000348990 GABARAPO95166 117 aa17.53■□□□□ 0.4
APP-202ENST00000348990 IL2P60568 153 aa17.53■□□□□ 0.4
APP-202ENST00000348990 PPP2R2BQ00005 443 aa17.53■□□□□ 0.4
APP-202ENST00000348990 SPANXN4Q5MJ08 99 aa17.53■□□□□ 0.4
APP-202ENST00000348990 PRAMEF19Q5SWL8 479 aa17.53■□□□□ 0.4
APP-202ENST00000348990 RAP1GAP2Q684P5 730 aa17.53■□□□□ 0.4
APP-202ENST00000348990 LETMD1Q6P1Q0 360 aa17.53■□□□□ 0.4
APP-202ENST00000348990 TMEM86AQ8N2M4 240 aa17.53■□□□□ 0.4
APP-202ENST00000348990 SETD9Q8NE22 299 aa17.53■□□□□ 0.4
APP-202ENST00000348990 PROX1Q92786 737 aa17.53■□□□□ 0.4
APP-202ENST00000348990 IKZF5Q9H5V7 419 aa17.53■□□□□ 0.4
APP-202ENST00000348990 A0A1W2PQH9 124 aa17.53■□□□□ 0.4
APP-202ENST00000348990 OR1I1O60431 355 aa17.53■□□□□ 0.4
APP-202ENST00000348990 CCNKO75909 580 aa17.53■□□□□ 0.4
APP-202ENST00000348990 OR4Q2P0C623 313 aa17.53■□□□□ 0.4
APP-202ENST00000348990 ZFP36L2P47974 494 aaKnown RBP17.53■□□□□ 0.4
APP-202ENST00000348990 TMC5Q6UXY8 1006 aa17.53■□□□□ 0.4
APP-202ENST00000348990 UBE2FQ969M7 185 aa17.53■□□□□ 0.4
APP-202ENST00000348990 PSD2Q9BQI7 771 aa17.53■□□□□ 0.4
APP-202ENST00000348990 BRINP2Q9C0B6 783 aa17.53■□□□□ 0.4
APP-202ENST00000348990 TP63Q9H3D4 680 aaPredicted RBP17.53■□□□□ 0.4
APP-202ENST00000348990 KAT8Q9H7Z6 458 aaKnown RBP17.53■□□□□ 0.4
APP-202ENST00000348990 KIAA1522Q9P206 1035 aaPredicted RBP17.53■□□□□ 0.4
APP-202ENST00000348990 MROH6A6NGR9 719 aa17.52■□□□□ 0.4
APP-202ENST00000348990 hCG_2039718K7EN88 272 aa17.52■□□□□ 0.4
APP-202ENST00000348990 TPD52L2O43399 206 aaKnown RBP17.52■□□□□ 0.4
APP-202ENST00000348990 SEC22BO75396 215 aa17.52■□□□□ 0.4
APP-202ENST00000348990 PPP5CP53041 499 aa17.52■□□□□ 0.4
APP-202ENST00000348990 TIAL1Q01085 375 aaKnown RBP eCLIP17.52■□□□□ 0.42e-7■■□□□ 13.1
APP-202ENST00000348990 ZNF691Q5VV52 312 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms