RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 CERS6Q6ZMG9 384 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 VPS35Q96QK1 796 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 KCNA7Q96RP8 456 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 GIMAP2Q9UG22 337 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 PSME2Q9UL46 239 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 HS3ST4Q9Y661 456 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 A0A1W2PPW3 197 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 TSPAN19P0C672 248 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 PPIBP23284 216 aaKnown RBP14.53□□□□□ -0.08
NUP50-201ENST00000347635 DDX6P26196 483 aaKnown RBP eCLIP14.53□□□□□ -0.08
NUP50-201ENST00000347635 KIR3DL1P43629 444 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 VEGFBP49765 207 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 ZNF773Q6PK81 442 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 HACD2Q6Y1H2 254 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 ATG14Q6ZNE5 492 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 CYP4Z2PQ8N1L4 340 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 CDK15Q96Q40 435 aa14.53□□□□□ -0.08
NUP50-201ENST00000347635 A0A1B0GVM2 712 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 TCAF2A6NFQ2 919 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 SAGE2PA6NJ88 616 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 J3KR12 359 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 TOR1BO14657 336 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 GRID2O43424 1007 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 PPP2R1BP30154 601 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 PTGER3P43115 390 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 ALDH3A2P51648 485 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 SLC2A7Q6PXP3 512 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 PRR23BQ6ZRT6 265 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 AHSA2Q719I0 299 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 ATL1Q8WXF7 558 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 OR8D1Q8WZ84 308 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 ITFG2Q969R8 447 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 SAMD11Q96NU1 681 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 CGREF1Q99674 301 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 STK16O75716 305 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 RASAL1O95294 804 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 PAPSS2O95340 614 aaPredicted RBP14.52□□□□□ -0.08
NUP50-201ENST00000347635 CLIC3O95833 236 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 DGKKQ5KSL6 1271 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 UBE2R2Q712K3 238 aaPredicted RBP14.52□□□□□ -0.08
NUP50-201ENST00000347635 ZC3H7AQ8IWR0 971 aaKnown RBP14.52□□□□□ -0.08
NUP50-201ENST00000347635 MINDY2Q8NBR6 621 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 OR7D4Q8NG98 312 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 TMEM74Q96NL1 305 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 CRTAC1Q9NQ79 661 aa14.52□□□□□ -0.08
NUP50-201ENST00000347635 FPGTO14772 594 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 BEST1O76090 585 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 GJA5P36382 358 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 MAGEA10P43363 369 aaPredicted RBP14.52□□□□□ -0.09
NUP50-201ENST00000347635 OLR1P78380 273 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 ANXA8L1Q5VT79 327 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 TP53INP2Q8IXH6 220 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 PIK3C3Q8NEB9 887 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 SLC45A3Q96JT2 553 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 APOLD1Q96LR9 279 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 SMOC2Q9H3U7 446 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 SAGE1Q9NXZ1 904 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 FAM25AB3EWG3 89 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 FAM25CB3EWG5 89 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 FAM25GB3EWG6 89 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 LEPRP48357 1165 aaKnown RBP14.52□□□□□ -0.09
NUP50-201ENST00000347635 RAB39AQ14964 217 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 ZDHHC21Q8IVQ6 265 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 TTC29Q8NA56 475 aaPredicted RBP14.52□□□□□ -0.09
NUP50-201ENST00000347635 Q96MT0 163 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 ADAMTS10Q9H324 1103 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 ZFYVE1Q9HBF4 777 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 KRCC1Q9NPI7 259 aaPredicted RBP14.52□□□□□ -0.09
NUP50-201ENST00000347635 TRPC4Q9UBN4 977 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 PCDHGC4Q9Y5F7 938 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 PCDHGA7Q9Y5G6 932 aa14.52□□□□□ -0.09
NUP50-201ENST00000347635 ZFP37Q9Y6Q3 630 aaPredicted RBP14.52□□□□□ -0.09
NUP50-201ENST00000347635 TAF4O00268 1085 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 SOCS2O14508 198 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 SLC22A1O15245 554 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 PDE9AO76083 593 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 PABPC1P11940 636 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 ALDH4A1P30038 563 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 GSTM5P46439 218 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 CEP78Q5JTW2 689 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 PHF10Q8WUB8 498 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 PAWRQ96IZ0 340 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 C8orf48Q96LL4 319 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 KLHL32Q96NJ5 620 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 FEM1AQ9BSK4 669 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 AARSD1Q9BTE6 412 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 POLR3BQ9NW08 1133 aaPredicted RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 DEC1Q9P2X7 70 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 ANGPT4Q9Y264 503 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 SCAMP3O14828 347 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 CATP04040 527 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 C8AP07357 584 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 IQCF3P0C7M6 154 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 ELP6Q0PNE2 266 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 MED22Q15528 200 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 XKR5Q6UX68 686 aa14.51□□□□□ -0.09
NUP50-201ENST00000347635 RBM23Q86U06 439 aaKnown RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 ZBTB8BQ8NAP8 495 aaPredicted RBP14.51□□□□□ -0.09
NUP50-201ENST00000347635 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.51□□□□□ -0.09
NUP50-201ENST00000347635 A0A1B0GVG6 124 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms