RNA–Protein interactions for RNA: ENST00000346562.6

NPAS3-201, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NPAS3, Length 5,847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-201ENST00000346562 ALPPP05187 535 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 AGXTP21549 392 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 RYKP34925 604 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 CARD16Q5EG05 197 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 LBX2Q6XYB7 198 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 PCDHGA11Q9Y5H2 935 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 PDHA2P29803 388 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 AKAP14Q86UN6 197 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 TMEM145Q8NBT3 493 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 GSTCDQ8NEC7 633 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 ZNF282Q9UDV7 671 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-201ENST00000346562 IL36AQ9UHA7 158 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 RCCD1A6NED2 376 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 NDUFS1P28331 727 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 DLG1Q12959 904 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 TMEM164Q5U3C3 297 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 C1orf127Q8N9H9 656 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 SLCO1B3Q9NPD5 702 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 USP2O75604 605 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-201ENST00000346562 PLGP00747 810 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-201ENST00000346562 GBE1Q04446 702 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 ZZZ3Q8IYH5 903 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 PGAM4Q8N0Y7 254 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 ZNF567Q8N184 647 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 POLR3BQ9NW08 1133 aaPredicted RBP22.78■■□□□ 1.24
NPAS3-201ENST00000346562 FKBPLQ9UIM3 349 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 CDC14AQ9UNH5 594 aa22.78■■□□□ 1.24
NPAS3-201ENST00000346562 CAPN14A8MX76 684 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 SERPINA3P01011 423 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 TCEA1P23193 301 aaKnown RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ROPN1LQ96C74 230 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 CLPTM1LQ96KA5 538 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 MNTQ99583 582 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ALG2Q9H553 416 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 NKIRAS2Q9NYR9 191 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ASB3Q9Y575 518 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 PCDHGA3Q9Y5H0 932 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ANXA2P2A6NMY6 339 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 APOC1P02654 83 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ANXA2P07355 339 aaKnown RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 SIM2Q14190 667 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 TNFAIP8L3Q5GJ75 292 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 TPGS2Q68CL5 300 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 LDB1Q86U70 411 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 OR52J3Q8NH60 311 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ZBED6CLQ96FA7 236 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ZNF514Q96K75 400 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 PI15O43692 258 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 MLLT3P42568 568 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 CLEC6AQ6EIG7 209 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ANKHQ9HCJ1 492 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 RUVBL1Q9Y265 456 aaKnown RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 WASHC1A8K0Z3 465 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 WASH3PC4AMC7 463 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 TPD52L2O43399 206 aaKnown RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 TRIM3O75382 744 aaPredicted RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 FAM155BO75949 473 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 CDKN2BP42772 138 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 TMEM44Q2T9K0 475 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 WASH2PQ6VEQ5 465 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ART5Q96L15 291 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 SERINC1Q9NRX5 453 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 FARSBQ9NSD9 589 aaKnown RBP22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ARL8BQ9NVJ2 186 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 C9J4A7 227 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 AP1S2P56377 157 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 FPGSQ05932 587 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 FCHO2Q0JRZ9 810 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 ABCB8Q9NUT2 735 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 PFDN2Q9UHV9 154 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 CDH22Q9UJ99 828 aa22.77■■□□□ 1.24
NPAS3-201ENST00000346562 CDH12P55289 794 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 C1QTNF8P60827 252 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 IFI44LQ53G44 452 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 FBXW11Q9UKB1 542 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 PAX7P23759 505 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 PRSS55Q6UWB4 352 aaPredicted RBP22.76■■□□□ 1.23
NPAS3-201ENST00000346562 AMZ2Q86W34 360 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 DNAJB8Q8NHS0 232 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 MKKSQ9NPJ1 570 aaPredicted RBP22.76■■□□□ 1.23
NPAS3-201ENST00000346562 NOS1APO75052 506 aaPredicted RBP22.76■■□□□ 1.23
NPAS3-201ENST00000346562 LRCH4O75427 683 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 COL6A1P12109 1028 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 AHCYP23526 432 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 OR2L3Q8NG85 312 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 SMPDL3BQ92485 455 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 DGCR14Q96DF8 476 aaKnown RBP22.76■■□□□ 1.23
NPAS3-201ENST00000346562 DIRAS2Q96HU8 199 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.76■■□□□ 1.23
NPAS3-201ENST00000346562 ATRNO75882 1429 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 BORCS5Q969J3 196 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 OR2AG1Q9H205 316 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 ABCB9Q9NP78 766 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 C11orf16Q9NQ32 467 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 RAB26Q9ULW5 256 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 PCDHGB7Q9Y5F8 929 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 PITPNM1O00562 1244 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 ENPP3O14638 875 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 IL7RP16871 459 aa22.76■■□□□ 1.23
NPAS3-201ENST00000346562 MC1RQ01726 317 aa22.76■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms