RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 KCNJ11Q14654 390 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 RNF187Q5TA31 235 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 CAPRIN2Q6IMN6 1127 aaKnown RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 CCDC81Q6ZN84 652 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 GPR155Q7Z3F1 870 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 PDZD3Q86UT5 571 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 HOOK3Q86VS8 718 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 LRRC6Q86X45 466 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 PPIL6Q8IXY8 311 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 ZSCAN1Q8NBB4 408 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 MCUQ8NE86 351 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 SPDYE1Q8NFV5 336 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 GPR150Q8NGU9 434 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 LCN9Q8WX39 176 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 RSC1A1Q92681 617 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 TFGQ92734 400 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 RMDN2Q96LZ7 410 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 ZNF778Q96MU6 729 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 FCRL3Q96P31 734 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 CCNL2Q96S94 520 aaPredicted RBP15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 KIFC1Q9BW19 673 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 SRMSQ9H3Y6 488 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 FBXO8Q9NRD0 319 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 HRASLS2Q9NWW9 162 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 SYBUQ9NX95 663 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 RNF14Q9UBS8 474 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 SLC24A2Q9UI40 661 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 GNPTGQ9UJJ9 305 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 SOX13Q9UN79 622 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 VPS9D1Q9Y2B5 631 aa15.39■□□□□ 0.05
TSPAN4-201ENST00000346501 PKD1L2Q7Z442 2459 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 C9orf172C9J069 976 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 VAPBO95292 243 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 RPN2P04844 631 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 SEPHS1P49903 392 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 GFERP55789 205 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 THOC5Q13769 683 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 BRD3Q15059 726 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 DNTTIP2Q5QJE6 756 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 MANEAQ5SRI9 462 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 FAM92BQ6ZTR7 304 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 SYDE1Q6ZW31 735 aaPredicted RBP15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 PRSS42Q7Z5A4 293 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 ASZ1Q8WWH4 475 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 CPT1BQ92523 772 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 CAPZA3Q96KX2 299 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 TCF12Q99081 682 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 ZNF768Q9H5H4 540 aaKnown RBP15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 TREX1Q9NSU2 369 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 OCIAD1Q9NX40 245 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 OGFRQ9NZT2 677 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 POLG2Q9UHN1 485 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 ASF1AQ9Y294 204 aa15.38■□□□□ 0.05
TSPAN4-201ENST00000346501 OR6C74A6NCV1 312 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 OR5K3A6NET4 321 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 EIF4E1BA6NMX2 242 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 USP27XA6NNY8 438 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 H3BMM5 538 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 OR1I1O60431 355 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 NMBRP28336 390 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 PREPP48147 710 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 LEPRP48357 1165 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 VAC14Q08AM6 782 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 CLN3Q13286 438 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 TMTC4Q5T4D3 741 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 PAPD7Q5XG87 772 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 DUS1LQ6P1R4 473 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 TTC23LQ6PF05 361 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 ZNF534Q76KX8 674 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 ZFAND4Q86XD8 727 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 KMT5CQ86Y97 462 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 CARFQ8N187 725 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 LILRA3Q8N6C8 439 aaPredicted RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 IL22RA1Q8N6P7 574 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 SIDT2Q8NBJ9 832 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 OR4E2Q8NGC2 313 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 CARD6Q9BX69 1037 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 OR52A5Q9H2C5 316 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 TRIT1Q9H3H1 467 aaKnown RBP15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 PDE7BQ9NP56 450 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 FOXJ2Q9P0K8 574 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 PYCARDQ9ULZ3 195 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 B3GALT1Q9Y5Z6 326 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 MRFAP1Q9Y605 127 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 MAD1L1Q9Y6D9 718 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 ADAMTS20P59510 1910 aa15.37■□□□□ 0.05
TSPAN4-201ENST00000346501 SPEGQ15772 3267 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 TEX51A0A1B0GUA7 166 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 FAM237BA0A1B0GVD1 139 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 TCRBV7S3A2A0A539 114 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 GSAPA4D1B5 854 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 TLCD2A6NGC4 264 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 GOLGA8MH3BSY2 632 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 CCDC188H7C350 402 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 NDC80O14777 642 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 PDHA2P29803 388 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 ACY1Q03154 408 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 HSPA14Q0VDF9 509 aa15.36■□□□□ 0.05
TSPAN4-201ENST00000346501 DHX34Q14147 1143 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms