RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 POU2F1P14859 743 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 CPOXP36551 454 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 SIM2Q14190 667 aaPredicted RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 GPRC6AQ5T6X5 926 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 MANEALQ5VSG8 457 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 RBM44Q6ZP01 1051 aaKnown RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 LSRQ86X29 649 aaPredicted RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 SNRNP27Q8WVK2 155 aaKnown RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 SUSD6Q92537 303 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 COL26A1Q96A83 441 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 PAPOLBQ9NRJ5 636 aaKnown RBP13.08□□□□□ -0.32
CASC4-202ENST00000345795 AASSQ9UDR5 926 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 SZT2Q5T011 3432 aa13.08□□□□□ -0.32
CASC4-202ENST00000345795 MLYCDO95822 493 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 IGLV3-25P01717 112 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 CCR2P41597 374 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 PTGER3P43115 390 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 CRATP43155 626 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 METAP1P53582 386 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 MTTPP55157 894 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 IRGCQ6NXR0 463 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 RETREG3Q86VR2 466 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 HS3ST5Q8IZT8 346 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 ITCHQ96J02 903 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 SIKE1Q9BRV8 207 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 NLE1Q9NVX2 485 aaPredicted RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 ARIH1Q9Y4X5 557 aaPredicted RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 SQORQ9Y6N5 450 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 SPTBP11277 2137 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 ARID2Q68CP9 1835 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 EI24O14681 340 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 DFNA5O60443 496 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 NPHS1O60500 1241 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 PGLSO95336 258 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 PEX11BO96011 259 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 OTCP00480 354 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 ATP5BP06576 529 aaKnown RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 CA3P07451 260 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 TUBB3Q13509 450 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 MAP7Q14244 749 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 MYLK3Q32MK0 819 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 METTL21CQ5VZV1 264 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 C22orf39Q6P5X5 142 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 ZNF513Q8N8E2 541 aaPredicted RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 CD200R1Q8TD46 325 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 GPR78Q96P69 363 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 RHBGQ9H310 441 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 MMADHCQ9H3L0 296 aaPredicted RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 RIBC2Q9H4K1 309 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 BATF3Q9NR55 127 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 RASSF1Q9NS23 344 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 ANK1P16157 1881 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 EVPLLA8MZ36 301 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 MYO1DO94832 1006 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 PRLP01236 227 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 FAM58BPP0C7Q3 252 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 GNAZP19086 355 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 DGKGP49619 791 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 PRIM2P49643 509 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 RNF144AP50876 292 aaPredicted RBP13.07□□□□□ -0.32
CASC4-202ENST00000345795 OCA2Q04671 838 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 SLC8B1Q6J4K2 584 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 CYP20A1Q6UW02 462 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 CLEC14AQ86T13 490 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.07□□□□□ -0.32
CASC4-202ENST00000345795 TOP1MTQ969P6 601 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 KIAA1191Q96A73 305 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 FBXL20Q96IG2 436 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 ZSWIM3Q96MP5 696 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 C11orf49Q9H6J7 331 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 LRTM1Q9HBL6 345 aa13.07□□□□□ -0.32
CASC4-202ENST00000345795 RGS14O43566 566 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 ESR1P03372 595 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 YBX1P67809 324 aaKnown RBP13.06□□□□□ -0.32
CASC4-202ENST00000345795 RING1Q06587 406 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 BLMHQ13867 455 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 CLVS1Q8IUQ0 354 aaPredicted RBP13.06□□□□□ -0.32
CASC4-202ENST00000345795 STK40Q8N2I9 435 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 ATG16L2Q8NAA4 619 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 LRRC58Q96CX6 371 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 MPP4Q96JB8 637 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 MGME1Q9BQP7 344 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 ORC6Q9Y5N6 252 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 TSPAN6O43657 245 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 LDLRP01130 860 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 IDO1P14902 403 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 UQCRBP14927 111 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 CA5AP35218 305 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 NFKB2Q00653 900 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 PIGFQ07326 219 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 GPNMBQ14956 572 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 C6orf136Q5SQH8 315 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.06□□□□□ -0.32
CASC4-202ENST00000345795 LIMS2Q7Z4I7 341 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 SLC39A11Q8N1S5 342 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 MACROD1Q9BQ69 325 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 FZD3Q9NPG1 666 aa13.06□□□□□ -0.32
CASC4-202ENST00000345795 DEC1Q9P2X7 70 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms