RNA–Protein interactions for RNA: ENST00000345617.7

HDAC4-201, Transcript of histone deacetylase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC4, Length 8,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-201ENST00000345617 ATP6AP2O75787 350 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 HMGN1P05114 100 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 RFX5P48382 616 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 PFKPQ01813 784 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 MERTKQ12866 999 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 NKD2Q969F2 451 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 SCP2D1Q9UJQ7 156 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 AGO1Q9UL18 857 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ADAMTS13Q76LX8 1427 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 FAM234BA2RU67 622 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ATXN1P54253 815 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 SLC10A7Q0GE19 358 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 TPRG1LQ5T0D9 272 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 ZNF572Q7Z3I7 529 aaPredicted RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 GALNT12Q8IXK2 581 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 MFSD14AQ96MC6 490 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 OSMRQ99650 979 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 A8MUI8 341 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 CXCR6O00574 342 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 TRPM4Q8TD43 1214 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 MRPL45Q9BRJ2 306 aaKnown RBP19.11■□□□□ 0.65
HDAC4-201ENST00000345617 DERAQ9Y315 318 aa19.11■□□□□ 0.65
HDAC4-201ENST00000345617 CFAP206Q8IYR0 622 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 DRAXINQ8NBI3 349 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-201ENST00000345617 ASTN1O14525 1302 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 GNAO1P09471 354 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 INSRRP14616 1297 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 KELP23276 732 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 FSTL1Q12841 308 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 GRIN3AQ8TCU5 1115 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 AGLP35573 1532 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 TEX13CA0A0J9YWL9 993 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 CACNB4O00305 520 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-201ENST00000345617 C7P10643 843 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 ZDHHC21Q8IVQ6 265 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 NCSTNQ92542 709 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 FAM86B1E9PN63 330 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 ZSCAN5DPP0CG00 497 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 YAP1P46937 504 aaKnown RBP19.1■□□□□ 0.65
HDAC4-201ENST00000345617 TCEAL3Q969E4 200 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 ITPAQ9BY32 194 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 DUSP16Q9BY84 665 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 EBF2Q9HAK2 575 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 SNTG1Q9NSN8 517 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 PLEKHA6Q9Y2H5 1048 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 ESPL1Q14674 2120 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 MYOM1P52179 1685 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 PRICKLE1Q96MT3 831 aaPredicted RBP19.1■□□□□ 0.65
HDAC4-201ENST00000345617 NELFEP18615 380 aaKnown RBP19.1■□□□□ 0.65
HDAC4-201ENST00000345617 ACVR2AP27037 513 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 NELFAQ9H3P2 528 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 NRCAMQ92823 1304 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 FMO1Q01740 532 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 MYNNQ9NPC7 610 aa19.1■□□□□ 0.65
HDAC4-201ENST00000345617 HEATR1Q9H583 2144 aaKnown RBP19.1■□□□□ 0.65
HDAC4-201ENST00000345617 RECQL4O94761 1208 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 IFI44LQ53G44 452 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 STYXQ8WUJ0 223 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 PCDHB16Q9NRJ7 776 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 SLC39A1Q9NY26 324 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 CTBP1Q13363 440 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 GHDCQ8N2G8 530 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 KCNS3Q9BQ31 491 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 HHATLQ9HCP6 504 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 OTOFQ9HC10 1997 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 SIM2Q14190 667 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-201ENST00000345617 GET4Q7L5D6 327 aaPredicted RBP19.09■□□□□ 0.65
HDAC4-201ENST00000345617 LRRC70Q7Z2Q7 622 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 LRTOMTQ8WZ04 291 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 USP29Q9HBJ7 922 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 C8GP07360 202 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 MAPK14Q16539 360 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 IQSEC1Q6DN90 963 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 KXD1Q9BQD3 176 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 POLR2J2Q9GZM3 115 aaKnown RBP19.09■□□□□ 0.65
HDAC4-201ENST00000345617 MMP27Q9H306 513 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 ATRNO75882 1429 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 RPS2P15880 293 aaKnown RBP19.09■□□□□ 0.65
HDAC4-201ENST00000345617 AGTR1P30556 359 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 SLC39A12Q504Y0 691 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 FAAH2Q6GMR7 532 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 ZBTB2Q8N680 514 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 LRRC52Q8N7C0 313 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 TTLQ8NG68 377 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 OR2L2Q8NH16 312 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 HSPA12BQ96MM6 686 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 MAF1Q9H063 256 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 ARHGAP23Q9P227 1491 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 MPSTP25325 297 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 CSTF2P33240 577 aaKnown RBP eCLIP19.09■□□□□ 0.651e-6■■■□□ 19
HDAC4-201ENST00000345617 FEM1AQ9BSK4 669 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 IFT172Q9UG01 1749 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 SPARCP09486 303 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 MC4RP32245 332 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 CRY2Q49AN0 593 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 S100A16Q96FQ6 103 aaKnown RBP19.09■□□□□ 0.65
HDAC4-201ENST00000345617 SPACA7Q96KW9 195 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 FTHL17Q9BXU8 183 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 TREM1Q9NP99 234 aa19.09■□□□□ 0.65
HDAC4-201ENST00000345617 NTSR2O95665 410 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms