RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 TRMT10BQ6PF06 316 aaKnown RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 TRMT10CQ7L0Y3 403 aaKnown RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 EFL1Q7Z2Z2 1120 aaKnown RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 DGLUCYQ7Z3D6 616 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 C17orf82Q86X59 251 aaPredicted RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 CTAGE3PQ8IX95 158 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 UNC5BQ8IZJ1 945 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 IFI44Q8TCB0 444 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 SLC37A2Q8TED4 501 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 KCNJ9Q92806 393 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 FOPNLQ96NB1 174 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 BIRC8Q96P09 236 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 CYTH2Q99418 400 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 SLC38A3Q99624 504 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 USB1Q9BQ65 265 aaKnown RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 WDR83Q9BRX9 315 aaKnown RBP11.59□□□□□ -0.55
SNCA-202ENST00000345009 CAAP1Q9H8G2 361 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 LRRC4CQ9HCJ2 640 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 PRDM9Q9NQV7 894 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 POT1Q9NUX5 634 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 TAS2R13Q9NYV9 303 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 KLHL42Q9P2K6 505 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 CPNE7Q9UBL6 633 aa11.59□□□□□ -0.55
SNCA-202ENST00000345009 LRP4O75096 1905 aa11.58□□□□□ -0.55
SNCA-202ENST00000345009 PLXNB3Q9ULL4 1909 aa11.58□□□□□ -0.55
SNCA-202ENST00000345009 ASXL3Q9C0F0 2248 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 A6NCN8 305 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 PRR19A6NJB7 356 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 AHSGP02765 367 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 RPN2P04844 631 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 FTH1P19P0C7X4 201 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 ITGB6P18564 788 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 AOAHP28039 575 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 MAPK9P45984 424 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 ACADVLP49748 655 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 SLC12A2P55011 1212 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 MPP1Q00013 466 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 DNAJC3Q13217 504 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 BRD3Q15059 726 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 PLEKHS1Q5SXH7 462 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 GUSBP11Q6P575 273 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 TTC23LQ6PF05 361 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 FAM83HQ6ZRV2 1179 aaPredicted RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 STRA8Q7Z7C7 330 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 CNPY4Q8N129 248 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 PNPLA1Q8N8W4 532 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 LRRN4CLQ8ND94 238 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 NAT14Q8WUY8 206 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 SKA2Q8WVK7 121 aaPredicted RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 INPP5DQ92835 1189 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 CCDC97Q96F63 343 aaPredicted RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 AHCYL2Q96HN2 611 aaKnown RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 VPS39Q96JC1 886 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 C12orf66Q96MD2 445 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 CPNE1Q99829 537 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 WWP1Q9H0M0 922 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 EPB41L1Q9H4G0 881 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 UCK1Q9HA47 277 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 LATS2Q9NRM7 1088 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 IMP3Q9NV31 184 aaKnown RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 PSMD13Q9UNM6 376 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 IKBKGQ9Y6K9 419 aa11.58□□□□□ -0.56
SNCA-202ENST00000345009 COL5A1P20908 1838 aaPredicted RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 ZFC3H1O60293 1989 aaKnown RBP11.58□□□□□ -0.56
SNCA-202ENST00000345009 SLC5A10A0PJK1 596 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 FAM159BA6NKW6 160 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 IQCF5A8MTL0 148 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 GIPC1O14908 333 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 SLCO2B1O94956 709 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 MTHFD1P11586 935 aaKnown RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 TNFRSF8P28908 595 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 ALDH4A1P30038 563 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 ATP5DP30049 168 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 CCR7P32248 378 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 GP5P40197 560 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 MAZP56270 477 aaKnown RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 GPX6P59796 221 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 GPLD1P80108 840 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 RPE65Q16518 533 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 CLPPQ16740 277 aaPredicted RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 CTSL3PQ5NE16 218 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 CAPRIN2Q6IMN6 1127 aaKnown RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 LRRC8EQ6NSJ5 796 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 KLHL35Q6PF15 583 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 CNSTQ6PJW8 725 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 MICALCLQ6ZW33 695 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 PDZD3Q86UT5 571 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 KRT222Q8N1A0 295 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 ZBTB2Q8N680 514 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 GPATCH11Q8N954 259 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 OR10G6Q8NH81 332 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 FBF1Q8TES7 1133 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 TFGQ92734 400 aaPredicted RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 CCDC74AQ96AQ1 378 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 DPYSL5Q9BPU6 564 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 CCDC3Q9BQI4 270 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 CCDC77Q9BR77 488 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 AARSD1Q9BTE6 412 aaKnown RBP11.57□□□□□ -0.56
SNCA-202ENST00000345009 MVB12BQ9H7P6 319 aa11.57□□□□□ -0.56
SNCA-202ENST00000345009 PLAC1Q9HBJ0 212 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms