RNA–Protein interactions for RNA: ENST00000344114.8

HERPUD1-202, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best) BASIC

Gene HERPUD1, Length 1,388 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-202ENST00000344114 SF3A3Q12874 501 aaKnown RBP eCLIP13.29□□□□□ -0.281e-8■■□□□ 12.2
HERPUD1-202ENST00000344114 OVGP1Q12889 678 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 DLG1Q12959 904 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 PDAP1Q13442 181 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 ITGA9Q13797 1035 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 CSHL1Q14406 222 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 ACAP2Q15057 778 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 CDKN3Q16667 212 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 PROX2Q3B8N5 592 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 LACTB2Q53H82 288 aaPredicted RBP13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 ZDHHC20Q5W0Z9 365 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 CES4AQ5XG92 561 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 ZCCHC23Q6ZST2 131 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 SNX20Q7Z614 316 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 MMAAQ8IVH4 418 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 AADATQ8N5Z0 425 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 GRIN3AQ8TCU5 1115 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 HEXDCQ8WVB3 486 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 CCDC126Q96EE4 140 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 RMDN2Q96LZ7 410 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 FAM129BQ96TA1 746 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 OXSMQ9NWU1 459 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 TAS2R13Q9NYV9 303 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 RRP15Q9Y3B9 282 aaKnown RBP13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 PCDHB1Q9Y5F3 818 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 DOCK9Q9BZ29 2069 aa13.29□□□□□ -0.28
HERPUD1-202ENST00000344114 MGAQ8IWI9 3026 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ATMQ13315 3056 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 COL6A6A6NMZ7 2263 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 TRBV5-4A0A0C4DH59 114 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 NPIPB15A6NHN6 443 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 TTC34A8MYJ7 566 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 F8W8V4 182 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 VPS26AO75436 327 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 SNUPNO95149 360 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 CLDN7O95471 211 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 PRAMEF1O95521 474 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ESR1P03372 595 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 SBK3P0C264 359 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 PRSS56P0CW18 603 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 CCDC166P0CW27 439 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 PKMP14618 531 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ZNF37AP17032 561 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ZNF30P17039 623 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 GLRBP48167 497 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ARFIP2P53365 341 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ABCE1P61221 599 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 RHDQ02161 417 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 SETDB1Q15047 1291 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 PTPRRQ15256 657 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 GPR33Q49SQ1 333 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 CRTC1Q6UUV9 634 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 PIANPQ8IYJ0 282 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 TMEM151AQ8N4L1 468 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 MFSD2AQ8NA29 543 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 CHST14Q8NCH0 376 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ZNF248Q8NDW4 579 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 FAM131CQ96AQ9 280 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 EID2BQ96D98 161 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 THOC1Q96FV9 657 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 KLHL32Q96NJ5 620 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 STN1Q9H668 368 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ACTR5Q9H9F9 607 aaPredicted RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 SYTL2Q9HCH5 934 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 ABCF3Q9NUQ8 709 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 KCNK4Q9NYG8 393 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 CPSF2Q9P2I0 782 aaKnown RBP13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 IL36AQ9UHA7 158 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 WASF2Q9Y6W5 498 aa13.28□□□□□ -0.28
HERPUD1-202ENST00000344114 GLYATL1P3A0A0U1RQE8 302 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 EDDM13A0A1B0GTR0 161 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 CCDC189A1A4V9 331 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 GAPDHSO14556 408 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 ADH1BP00325 375 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 ZNF7P17097 686 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 BPIP17213 487 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 C5AR1P21730 350 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 RPS3P23396 243 aaKnown RBP eCLIP13.27□□□□□ -0.295e-7■■□□□ 12.5
HERPUD1-202ENST00000344114 ATP5F1P24539 256 aaPredicted RBP13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 FMO4P31512 558 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 SERPINB5P36952 375 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 PGGT1BP53609 377 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 DNAJB13P59910 316 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 PPP2CBP62714 309 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 PPP2CAP67775 309 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 TIAL1Q01085 375 aaKnown RBP eCLIP13.27□□□□□ -0.291e-6■■■■■ 34.1
HERPUD1-202ENST00000344114 SPDYAQ5MJ70 313 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 UGT3A1Q6NUS8 523 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 TAS2R42Q7RTR8 314 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 PIM3Q86V86 326 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 IQCHQ86VS3 1027 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 SLC22A9Q8IVM8 553 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 WDR75Q8IWA0 830 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 OR14C36Q8NHC7 312 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 RFWD2Q8NHY2 731 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 PIWIL2Q8TC59 973 aaKnown RBP13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 HIC2Q96JB3 615 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 PLEKHG4BQ96PX9 1271 aa13.27□□□□□ -0.29
HERPUD1-202ENST00000344114 TMEM120AQ9BXJ8 343 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms