RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 MRPS31Q92665 395 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 TFAP2CQ92754 450 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 BIRC7Q96CA5 298 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 RNF145Q96MT1 663 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 SH3GL3Q99963 347 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 HERC2P3Q9BVR0 1158 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ANKRD60Q9BZ19 345 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 RNF208Q9H0X6 261 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 EPB41L1Q9H4G0 881 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 SOX17Q9H6I2 414 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 PNPLA3Q9NST1 481 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ABCB8Q9NUT2 735 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 H3BSA7 217 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 FKTNO75072 461 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 GNRH1P01148 92 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 RPS3P23396 243 aaKnown RBP eCLIP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 SERPINA4P29622 427 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 EEFSECP57772 596 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 CDKN3Q16667 212 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 PLEKHG6Q3KR16 790 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 LRRC66Q68CR7 880 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 DLEU7Q6UYE1 221 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 TMIGD2Q96BF3 282 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 FBXL20Q96IG2 436 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ADI1Q9BV57 179 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 LRRC3Q9BY71 257 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ST14Q9Y5Y6 855 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 SLC4A7Q9Y6M7 1214 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 REV3LO60673 3130 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 H3BNH8 94 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 GLUD1P00367 558 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ENO2P09104 434 aaPredicted RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 MRPL19P49406 292 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 NR1H2P55055 460 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 LSAMPQ13449 338 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 IMPG1Q17R60 797 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 PYCR3Q53H96 274 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 GPRC6AQ5T6X5 926 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 GLYATQ6IB77 296 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 CRTC1Q6UUV9 634 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ITIH5Q86UX2 942 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 PTRH1Q86Y79 214 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 OFCC1Q8IZS5 231 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 NXPE1Q8N323 547 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ACDQ96AP0 544 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ULK4Q96C45 1275 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 RHBDF1Q96CC6 855 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 C9orf16Q9BUW7 83 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 CD244Q9BZW8 370 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 DDX18Q9NVP1 670 aaKnown RBP14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 SPG21Q9NZD8 308 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 ATP11BQ9Y2G3 1177 aa14.62□□□□□ -0.07
VIPAS39-202ENST00000343765 EYSQ5T1H1 3165 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 KRT87PA6NCN2 255 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 LOC730098B7Z3J9 87 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 DFNA5O60443 496 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 OLFM2O95897 454 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 PCNAP12004 261 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 RFC2P35250 354 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 INTS11Q5TA45 600 aaKnown RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 IRAK1BP1Q5VVH5 260 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 OR2AP1Q8NGE2 309 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 MAGEE2Q8TD90 523 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 MYLIPQ8WY64 445 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 NSMCE2Q96MF7 247 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 CGREF1Q99674 301 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 RBM38Q9H0Z9 239 aaKnown RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 ZDHHC6Q9H6R6 413 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 CD84Q9UIB8 345 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 ZNF490Q9ULM2 529 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 KIAA0100Q14667 2235 aaKnown RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 ZNF23P17027 643 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 NFKBIAP25963 317 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 VARSP26640 1264 aaKnown RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 MERTKQ12866 999 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 ATP6AP1Q15904 470 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 FAM174BQ3ZCQ3 159 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 AASDHQ4L235 1098 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 CNKSR3Q6P9H4 555 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 DTWD1Q8N5C7 304 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 KRTCAP2Q8N6L1 136 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 VWCEQ96DN2 955 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 HAUS8Q9BT25 410 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 CHID1Q9BWS9 393 aa14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 KIAA1522Q9P206 1035 aaPredicted RBP14.61□□□□□ -0.07
VIPAS39-202ENST00000343765 PIKFYVEQ9Y2I7 2098 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 TANC1Q9C0D5 1861 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 TRBV5-4A0A0C4DH59 114 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 A0A1B0GVG6 124 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 ANKRD28O15084 1053 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 ACOX3O15254 700 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 TGM5O43548 720 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 SOCS5O75159 536 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 SEC22BO75396 215 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 CRY1Q16526 586 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 CPSF6Q16630 551 aaKnown RBP eCLIP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 ATP13A5Q4VNC0 1218 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 MPPE1Q53F39 396 aa14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 OTUD3Q5T2D3 398 aaPredicted RBP14.6□□□□□ -0.07
VIPAS39-202ENST00000343765 GRAMD4Q6IC98 578 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms