RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 DCDC5Q6ZRR9 648 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ZFAND4Q86XD8 727 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 TSSK3Q96PN8 268 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 EPS8L2Q9H6S3 715 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 HPS4Q9NQG7 708 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 RASSF1Q9NS23 344 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 NLE1Q9NVX2 485 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 MAGEL2Q9UJ55 1249 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 PDE10AQ9Y233 779 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 NBNO60934 754 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 GJB5O95377 273 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ASGR1P07306 291 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 UMPSP11172 480 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 MBL2P11226 248 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 PSMB9P28065 219 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ZFP36L2P47974 494 aaKnown RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 NEK2P51955 445 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 NFE2Q16621 373 aaPredicted RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 PNPT1Q8TCS8 783 aaKnown RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 CD200R1Q8TD46 325 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 OR52E6Q96RD3 313 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 SGIP1Q9BQI5 828 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 FUNDC2Q9BWH2 189 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 POLE4Q9NR33 117 aa14.17□□□□□ -0.14
CPSF7-201ENST00000340437 PAIP2BQ9ULR5 123 aaKnown RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 RBMX2Q9Y388 322 aaKnown RBP14.17□□□□□ -0.14
CPSF7-201ENST00000340437 ZSWIM8A7E2V4 1837 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 PLXNB2O15031 1838 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 FUOMA2VDF0 154 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 IQCA1LA6NCM1 817 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 KRT87PA6NCN2 255 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 PFDN6O15212 129 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 HTR1EP28566 365 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 AKT1P31749 480 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 TTKP33981 857 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 SGSHP51688 502 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 CD47Q08722 323 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 RGS21Q2M5E4 152 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 RNF219Q5W0B1 726 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 DLEU7Q6UYE1 221 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 FEM1AQ9BSK4 669 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 FAM118AQ9NWS6 357 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 FCF1Q9Y324 198 aaKnown RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 M0R3G1 203 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 AGRPO00253 132 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 OPRL1P41146 370 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 PAGE2BQ5JRK9 111 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 RASAL3Q86YV0 1011 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF683Q8IZ20 524 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 CARNMT1Q8N4J0 409 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 TEX26Q8N6G2 289 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 TRPV1Q8NER1 839 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 TYW5A2RUC4 315 aaKnown RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 C16orf96A6NNT2 1141 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 CAPN15O75808 1086 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 SERPINA1P01009 418 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 EIF2B2P49770 351 aaKnown RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 CYP4F3Q08477 520 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF177Q13360 481 aaPredicted RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 DNASE1L3Q13609 305 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 MORN1Q5T089 497 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 SLCO6A1Q86UG4 719 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 SPARTQ8N0X7 666 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 SLC13A3Q8WWT9 602 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 FAM120BQ96EK7 910 aaKnown RBP14.16□□□□□ -0.14
CPSF7-201ENST00000340437 FAM210AQ96ND0 272 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF583Q96ND8 569 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 GPR62Q9BZJ7 368 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 NMRK2Q9NPI5 230 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 PCDHB8Q9UN66 801 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 ORC6Q9Y5N6 252 aa14.16□□□□□ -0.14
CPSF7-201ENST00000340437 WASH4PA8MWX3 477 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 ALPLP05186 524 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF140P52738 457 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 FOXM1Q08050 763 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 TSTA3Q13630 321 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 CTU2Q2VPK5 515 aaKnown RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 ARMC12Q5T9G4 340 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 TMEM236Q5W0B7 351 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 RNF19BQ6ZMZ0 732 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 EFL1Q7Z2Z2 1120 aaKnown RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 RBM23Q86U06 439 aaKnown RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 ALDH16A1Q8IZ83 802 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 UGT2B28Q9BY64 529 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 AMBRA1Q9C0C7 1298 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 PSME2Q9UL46 239 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 ZNF490Q9ULM2 529 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 EIF3LQ9Y262 564 aaKnown RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 H0Y858 1186 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 hCG_2039718K7EN88 272 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 CXCR6O00574 342 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 PFKLP17858 780 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 CDH3P22223 829 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 TTPAP49638 278 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 MOGQ16653 247 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 C6orf141Q5SZD1 244 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 PRSS55Q6UWB4 352 aaPredicted RBP14.15□□□□□ -0.14
CPSF7-201ENST00000340437 TMEM179BQ7Z7N9 219 aa14.15□□□□□ -0.14
CPSF7-201ENST00000340437 IGFN1Q86VF2 1251 aa14.15□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms