RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CHST14Q8NCH0 376 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 ATP6V1C2Q8NEY4 427 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 C1orf50Q9BV19 199 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 CAPN14A8MX76 684 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 SEC24DO94855 1032 aaPredicted RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 SRFP11831 508 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 SLC1A2P43004 574 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 CASP6P55212 293 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 DEFB133Q30KQ1 61 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 TRIM61Q5EBN2 209 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 CPTPQ5TA50 214 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 PIM3Q86V86 326 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 LONP2Q86WA8 852 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 DCUN1D3Q8IWE4 304 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 DNASE1L2Q92874 299 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 MRPL48Q96GC5 212 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 CCT8L2Q96SF2 557 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 RARRES3Q9UL19 164 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 CORO2BQ9UQ03 480 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 YBX2Q9Y2T7 364 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 REXO2Q9Y3B8 237 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 DOCK2Q92608 1830 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 TMX2-CTNND1H3BSU7 103 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 ECI2O75521 394 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 HOXC12P31275 282 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 PSMD4P55036 377 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 GDF10P55107 478 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 QPCTQ16769 361 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 PRMT9Q6P2P2 845 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 FAM20CQ8IXL6 584 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 ZNF473Q8WTR7 871 aaKnown RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 RNF38Q9H0F5 515 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 OBP2AQ9NY56 170 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 POLR3HQ9Y535 204 aaPredicted RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 OR6C74A6NCV1 312 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 H3BQF6 201 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 SLC28A2O43868 658 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 METTL18O95568 372 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 LDOC1O95751 146 aaPredicted RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 MAOBP27338 520 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 CD38P28907 300 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 IRX1P78414 480 aaPredicted RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 IFI35P80217 286 aaPredicted RBP12.61□□□□□ -0.39
LIN54-201ENST00000340417 MAPKAPK3Q16644 382 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 TMEM31Q5JXX7 168 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 PM20D1Q6GTS8 502 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 P3H2Q8IVL5 708 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 CATSPER1Q8NEC5 780 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 EME1Q96AY2 570 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 DGAT2Q96PD7 388 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 KLHL20Q9Y2M5 609 aa12.61□□□□□ -0.39
LIN54-201ENST00000340417 HLA-DQA2P01906 255 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 COL6A2P12110 1019 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 TSNQ15631 228 aaKnown RBP12.6□□□□□ -0.39
LIN54-201ENST00000340417 ZBTB6Q15916 424 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 FBXO48Q5FWF7 155 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 ANKRD22Q5VYY1 191 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 RASGEF1CQ8N431 466 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 PANX1Q96RD7 426 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 CROTQ9UKG9 612 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 PCDHGA11Q9Y5H2 935 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 FAM214AQ32MH5 1076 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 CYGBQ8WWM9 190 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 LDAHQ9H6V9 325 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 MAGEE1Q9HCI5 957 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 A0A0J9YYE9 177 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 MRASO14807 208 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 AP2A2O94973 939 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 DCAF12L1Q5VU92 463 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 ALKAL1Q6UXT8 129 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 DCP2Q8IU60 420 aaKnown RBP12.6□□□□□ -0.39
LIN54-201ENST00000340417 CEP76Q8TAP6 659 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 NACC2Q96BF6 587 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 TMEM59LQ9UK28 342 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 EGFP01133 1207 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 HSF5Q4G112 596 aaPredicted RBP12.6□□□□□ -0.39
LIN54-201ENST00000340417 KIAA0895LQ68EN5 471 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 P4HA3Q7Z4N8 544 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 CYP4Z2PQ8N1L4 340 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 DLG3Q92796 817 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 BORCS6Q96GS4 357 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 HERPUD2Q9BSE4 406 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 FBRSL1Q9HCM7 1045 aaKnown RBP12.6□□□□□ -0.39
LIN54-201ENST00000340417 C2CD4DB7Z1M9 353 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 ANXA4P09525 319 aaPredicted RBP12.6□□□□□ -0.39
LIN54-201ENST00000340417 ATP6V1B2P21281 511 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 HHEXQ03014 270 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 VPS26BQ4G0F5 336 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 ZNF648Q5T619 568 aaPredicted RBP12.6□□□□□ -0.39
LIN54-201ENST00000340417 SLC29A4Q7RTT9 530 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 EID2Q8N6I1 236 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 ACTRT2Q8TDY3 377 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 PEBP4Q96S96 227 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 LRTM1Q9HBL6 345 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 TIAM2Q8IVF5 1701 aa12.6□□□□□ -0.39
LIN54-201ENST00000340417 A0A0G2JN53 185 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 SNUPNO95149 360 aaKnown RBP12.59□□□□□ -0.39
LIN54-201ENST00000340417 VAV1P15498 845 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 ASMTP46597 345 aa12.59□□□□□ -0.39
LIN54-201ENST00000340417 CSTF3Q12996 717 aaKnown RBP12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms