RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 UMODL1-AS1Q8N2C9 162 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 ATAD1Q8NBU5 361 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 TRIB2Q92519 343 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 RPL3LQ92901 407 aaKnown RBP11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 CGREF1Q99674 301 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 MIR1-1HGQ9H1L0 117 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 TFB2MQ9H5Q4 396 aaKnown RBP11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 PRDM5Q9NQX1 630 aaPredicted RBP11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 FKBPLQ9UIM3 349 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 BAG5Q9UL15 447 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 GABRQQ9UN88 632 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 NOD1Q9Y239 953 aa11.78□□□□□ -0.52
CCDC144CP-201ENST00000340196 SCN10AQ9Y5Y9 1956 aa11.77□□□□□ -0.52
CCDC144CP-201ENST00000340196 MOXD2PA6NHM9 499 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 RAMP2O60895 175 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ZNF12P17014 697 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ERVK-8P63133 956 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 SIM2Q14190 667 aaPredicted RBP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 C6orf141Q5SZD1 244 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 IRAK1BP1Q5VVH5 260 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CYP20A1Q6UW02 462 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CXCL17Q6UXB2 119 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 GPRIN3Q6ZVF9 776 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ANKRD46Q86W74 232 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ZDHHC13Q8IUH4 622 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 METTL6Q8TCB7 284 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 UBE2FQ969M7 185 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 MTFMTQ96DP5 389 aaKnown RBP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 SH3YL1Q96HL8 342 aaPredicted RBP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ALPK1Q96QP1 1244 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 VNN3Q9NY84 501 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 PDE10AQ9Y233 779 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CPQQ9Y646 472 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 NDUFS3O75489 264 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ENO2P09104 434 aaPredicted RBP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 HTR1EP28566 365 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 EPHA2P29317 976 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CYP2C18P33260 490 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CA5AP35218 305 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 FLT3LGP49771 235 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ZNF135P52742 658 aaPredicted RBP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 TMBIM6P55061 237 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 EEFSECP57772 596 aaKnown RBP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ARPC4P59998 168 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CHRNB3Q05901 458 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 GRSF1Q12849 480 aaKnown RBP eCLIP11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 PRKG2Q13237 762 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CTSL3PQ5NE16 218 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 MFSD14CQ5VZR4 134 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 SLCO6A1Q86UG4 719 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CADM3Q8N126 398 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 RHEBL1Q8TAI7 183 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 NCLNQ969V3 563 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 SPON2Q9BUD6 331 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 BRINP2Q9C0B6 783 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 CCDC68Q9H2F9 335 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 MRGBPQ9NV56 204 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 TAS2R13Q9NYV9 303 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 ADGRE2Q9UHX3 823 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 VPS51Q9UID3 782 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 GIT1Q9Y2X7 761 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 COMMD10Q9Y6G5 202 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 SLC30A1Q9Y6M5 507 aa11.77□□□□□ -0.53
CCDC144CP-201ENST00000340196 XIRP2A4UGR9 3374 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 A0A1W2PQ67 120 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 KRT87PA6NCN2 255 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 DEAF1O75398 565 aaPredicted RBP11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 FTH1P02794 183 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 ANXA6P08133 673 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 UROSP10746 265 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 KCNQ1P51787 676 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 NCS1P62166 190 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 RAD51Q06609 339 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 DMPKQ09013 629 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 INAQ16352 499 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 CTF1Q16619 201 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 AP5B1Q2VPB7 878 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 FAM174BQ3ZCQ3 159 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 GCNT7Q6ZNI0 430 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 GLT6D1Q7Z4J2 308 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 METTL23Q86XA0 190 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 SDR16C5Q8N3Y7 309 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 OR4F6Q8NGB9 312 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 TRUB1Q8WWH5 349 aaKnown RBP11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 SLC25A37Q9NYZ2 338 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 PRG3Q9Y2Y8 225 aaPredicted RBP11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 PATJQ8NI35 1801 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 DYTNA2CJ06 578 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 FAM234BA2RU67 622 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 UPK3BL1B0FP48 263 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 UPK3BL2E5RIL1 263 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 PRAMEF12O95522 483 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 RAP2AP10114 183 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 S100A1P23297 94 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 JAK1P23458 1154 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 TTKP33981 857 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 SUOXP51687 545 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 FOXM1Q08050 763 aa11.76□□□□□ -0.53
CCDC144CP-201ENST00000340196 RAPSNQ13702 412 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms