RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 NMRAL1Q9HBL8 299 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CYP4F12Q9HCS2 524 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 AMBNQ9NP70 447 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CATSPERZQ9NTU4 200 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TMOD3Q9NYL9 352 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ELF5Q9UKW6 265 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 MGAT4BQ9UQ53 548 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 PCDHA11Q9Y5I1 949 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 A0A0A6YYJ9 748 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TTC24A2A3L6 582 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM74A7A6NL05 159 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 KPNA7A9QM74 516 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CHADO15335 359 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 STX7O15400 261 aaKnown RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 PRSS23O95084 383 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 POMCP01189 267 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ACSM4P0C7M7 580 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 NPR1P16066 1061 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF3P17036 446 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 F8A1P23610 371 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 KDELR1P24390 212 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 PSMA2P25787 234 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 GNA15P30679 374 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CDH13P55290 713 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 GABARAPL2P60520 117 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 HERVK_113P63132 956 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 PUDPQ08623 228 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CDK5R2Q13319 367 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF169Q14929 603 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM74A3Q4VXF1 159 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ERICH5Q6P6B1 374 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 CNSTQ6PJW8 725 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 C1orf186Q6ZWK4 172 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ZC3HC1Q86WB0 502 aaKnown RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC44A2Q8IWA5 706 aaPredicted RBP9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM217AQ8IXS0 508 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TCTE3Q8IZS6 198 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 JOSD2Q8TAC2 188 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 KLHL6Q8WZ60 621 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 SAMD11Q96NU1 681 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ACOT13Q9NPJ3 140 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 KCNH7Q9NS40 1196 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC22A11Q9NSA0 550 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ABCB8Q9NUT2 735 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC39A1Q9NY26 324 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TRPS1Q9UHF7 1281 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 NARFQ9UHQ1 456 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 ACOT9Q9Y305 439 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 AUP1Q9Y679 476 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 NUP188Q5SRE5 1749 aa9.51□□□□□ -0.89
PTCHD4-201ENST00000339488 TCRBV5S2A0A599 114 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC22A23A1A5C7 686 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 POM121CA8CG34 1229 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 WASHC1A8K0Z3 465 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 HPGDSO60760 199 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 C7P10643 843 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 GAP43P17677 238 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ACVR2AP27037 513 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 TNFSF8P32971 234 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 NUP62P37198 522 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 KIR2DL3P43628 341 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 GSK3BP49841 420 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 S100A12P80511 92 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 MVKQ03426 396 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 TAF1CQ15572 869 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ETFDHQ16134 617 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 DUSP6Q16828 381 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 IER5Q5VY09 327 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 LCN8Q6JVE9 175 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ANKRD54Q6NXT1 300 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM180BQ6P0A1 224 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 FAM160B2Q86V87 743 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 FUNDC1Q8IVP5 155 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 AMER2Q8N7J2 671 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 XXYLT1Q8NBI6 393 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PHOSPHO2Q8TCD6 241 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 CA5BP1Q8WTZ4 195 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 NSUN4Q96CB9 384 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 TEPSINQ96N21 525 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 SLC30A2Q9BRI3 323 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PLA2G12BQ9BX93 195 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ZNF275Q9NSD4 429 aaPredicted RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 OXSMQ9NWU1 459 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 RAPGEFL1Q9UHV5 662 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 SARDHQ9UL12 918 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 BAIAP2Q9UQB8 552 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 LYVE1Q9Y5Y7 322 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 ARFGEF1Q9Y6D6 1849 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 FABP7O15540 132 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 BEST1O76090 585 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 APOC1P02654 83 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 AHSGP02765 367 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 CAPN3P20807 821 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 MGAT1P26572 445 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 MTHFRP42898 656 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 CLCN4P51793 760 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PLK1P53350 603 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 PRKAA1Q13131 559 aa9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 RBMS2Q15434 407 aaKnown RBP9.5□□□□□ -0.89
PTCHD4-201ENST00000339488 HKDC1Q2TB90 917 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms