RNA–Protein interactions for RNA: ENST00000338458.8

ARHGEF3-202, Transcript of Rho guanine nucleotide exchange factor 3, humanhuman

TSL 1 (best) BASIC

Gene ARHGEF3, Length 3,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF3-202ENST00000338458 ULK4Q96C45 1275 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 MRPL1Q9BYD6 325 aaKnown RBP9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 SLC6A17Q9H1V8 727 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 HCN2Q9UL51 889 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 PPM1HQ9ULR3 514 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 RNF11Q9Y3C5 154 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 OARD1Q9Y530 152 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 DNAH14Q0VDD8 3507 aa9.9□□□□□ -0.82
ARHGEF3-202ENST00000338458 A0A1W2PQ67 120 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 KLK8O60259 260 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 TBX10O75333 385 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 FGF4P08620 206 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 HIST1H2AGP0C0S8 130 aaPredicted RBP9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 C6P13671 934 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 LBPP18428 481 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 HIST1H2ADP20671 130 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 CD9P21926 228 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 AOAHP28039 575 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 PDHA2P29803 388 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 GPR1P46091 355 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 INHBCP55103 352 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 HMGCS1Q01581 520 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 CNTN1Q12860 1018 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 SQLEQ14534 574 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 ELAVL3Q14576 367 aaKnown RBP9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 RAB30Q15771 203 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 LRRC36Q1X8D7 754 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 AAK1Q2M2I8 961 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 PPFIBP2Q8ND30 876 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 UCMAQ8WVF2 138 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 BTN2A2Q8WVV5 523 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 GLYATL1Q969I3 302 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 VPS33AQ96AX1 596 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 RHBDF1Q96CC6 855 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 PDLIM5Q96HC4 596 aaKnown RBP9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 LRCH3Q96II8 777 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 HIST1H2AHQ96KK5 128 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 HIST1H2AJQ99878 128 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 H2AFJQ9BTM1 129 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 GMPR2Q9P2T1 348 aaKnown RBP9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 TMEM98Q9Y2Y6 226 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 PLXNB3Q9ULL4 1909 aa9.9□□□□□ -0.83
ARHGEF3-202ENST00000338458 LOC730098B7Z3J9 87 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SCAMP1O15126 338 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SPINT1O43278 529 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SYNCRIPO60506 623 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 UROSP10746 265 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 NFKBIAP25963 317 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 RAP1GDS1P52306 607 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 THOP1P52888 689 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SATB1Q01826 763 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 ABRAXAS2Q15018 415 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 NR6A1Q15406 480 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 TCEA2Q15560 299 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 CCSMST1Q4G0I0 132 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 TECPR1Q7Z6L1 1165 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 MYOCQ99972 504 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 P2RY13Q9BPV8 354 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PRSS16Q9NQE7 514 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 POMPQ9Y244 141 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 FBP2O00757 339 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SNUPNO95149 360 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 ANXA5P08758 320 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 LAMP2P13473 410 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 NEK2P51955 445 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 BNC2Q6ZN30 1099 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 FUNDC1Q8IVP5 155 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PLPP6Q8IY26 295 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 TRAM1L1Q8N609 369 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 TEX37Q96LM6 180 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 ZSCAN5AQ9BUG6 496 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 CD244Q9BZW8 370 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 MMADHCQ9H3L0 296 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 DCLRE1BQ9H816 532 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 NOP53Q9NZM5 478 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PTBP2Q9UKA9 531 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 TRPM6Q9BX84 2022 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 MRASO14807 208 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 MID1O15344 667 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SGTAO43765 313 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 STK16O75716 305 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 WDR47O94967 919 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 SNRPB2P08579 225 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 XRCC1P18887 633 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 IGFBP4P22692 258 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 GGT5P36269 586 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 BDKRB1P46663 353 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PTDSS1P48651 473 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PTPN5P54829 565 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 CAPRIN1Q14444 709 aaKnown RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 ZXDCQ2QGD7 858 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PREPLQ4J6C6 727 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 REP15Q6BDI9 236 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 CHSY3Q70JA7 882 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 FBXW8Q8N3Y1 598 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 RNF175Q8N4F7 328 aa9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 ZNF513Q8N8E2 541 aaPredicted RBP9.89□□□□□ -0.83
ARHGEF3-202ENST00000338458 PLA2G15Q8NCC3 412 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms