RNA–Protein interactions for RNA: ENST00000335183.10

CDKN3-202, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDKN3, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-202ENST00000335183 SHANK1Q9Y566 2161 aa23.73■■□□□ 1.39
CDKN3-202ENST00000335183 USP9YO00507 2555 aaPredicted RBP23.73■■□□□ 1.39
CDKN3-202ENST00000335183 ICE1Q9Y2F5 2266 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 GSAPA4D1B5 854 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 MEN1O00255 615 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 ANXA9O76027 345 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 AGFG2O95081 481 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 LCA5LO95447 670 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 PYGMP11217 842 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 RALBP11234 206 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 ABRQ12979 859 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 OLIG2Q13516 323 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 FHL5Q5TD97 284 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 ITPRIPL1Q6GPH6 555 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 CAPRIN2Q6IMN6 1127 aaKnown RBP23.72■■□□□ 1.39
CDKN3-202ENST00000335183 LCN10Q6JVE6 187 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 ZNF517Q6ZMY9 492 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-202ENST00000335183 DSELQ8IZU8 1212 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 GALNT11Q8NCW6 608 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 LINC00615Q96LM1 132 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-202ENST00000335183 LRFN5Q96NI6 719 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 GORASP1Q9BQQ3 440 aa23.72■■□□□ 1.39
CDKN3-202ENST00000335183 USP9XQ93008 2570 aaPredicted RBP23.72■■□□□ 1.39
CDKN3-202ENST00000335183 PIKFYVEQ9Y2I7 2098 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 TMEM150CB9EJG8 249 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 SGTAO43765 313 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 TMPRSS15P98073 1019 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 C4orf17Q53FE4 359 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 PLEKHS1Q5SXH7 462 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 CCDC181Q5TID7 509 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 FAM69BQ5VUD6 431 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 OR13C4Q8NGS5 318 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 LCN9Q8WX39 176 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 RBM41Q96IZ5 413 aaKnown RBP23.71■■□□□ 1.39
CDKN3-202ENST00000335183 FERD3LQ96RJ6 166 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 CCM2Q9BSQ5 444 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 FAM96AQ9H5X1 160 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 MLXIPLQ9NP71 852 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 C1GALT1Q9NS00 363 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 POMT2Q9UKY4 750 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 HEBP2Q9Y5Z4 205 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 ESPL1Q14674 2120 aa23.71■■□□□ 1.39
CDKN3-202ENST00000335183 C5orf60A6NFR6 353 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 APOC4-APOC2K7ER74 178 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 TMEM63AO94886 807 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 APOC2P02655 101 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 MAGEA1P43355 309 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 PREPP48147 710 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 XIAPP98170 497 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 BBS12Q6ZW61 710 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 ACVR1CQ8NER5 493 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 HM13Q8TCT9 377 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 ADAMTS17Q8TE56 1095 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 SLC7A5P2Q9GIP4 190 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 SRMSQ9H3Y6 488 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 TCFL5Q9UL49 500 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.7■■□□□ 1.38
CDKN3-202ENST00000335183 ZNF451Q9Y4E5 1061 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 CCDC88CQ9P219 2028 aa23.7■■□□□ 1.38
CDKN3-202ENST00000335183 SPTBN1Q01082 2364 aaKnown RBP23.69■■□□□ 1.38
CDKN3-202ENST00000335183 MACROD2A1Z1Q3 448 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 CCDC66A2RUB6 948 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 MATN2O00339 956 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 RAB40ALP0C0E4 278 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 CYP2A7P20853 494 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 PSMB4P28070 264 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 PRLHRP49683 370 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 HADHBP55084 474 aaKnown RBP23.69■■□□□ 1.38
CDKN3-202ENST00000335183 HIST2H2BCQ6DN03 193 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 RANBP10Q6VN20 620 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 CNGA4Q8IV77 575 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 OR1L3Q8NH93 324 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 KRT35Q92764 455 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 ULK4Q96C45 1275 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 COPS8Q99627 209 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 FERMT1Q9BQL6 677 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 NLNQ9BYT8 704 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 ACTR5Q9H9F9 607 aaPredicted RBP23.69■■□□□ 1.38
CDKN3-202ENST00000335183 LUZP4Q9P127 313 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 TFR2Q9UP52 801 aa23.69■■□□□ 1.38
CDKN3-202ENST00000335183 RP1L1Q8IWN7 2480 aaPredicted RBP23.69■■□□□ 1.38
CDKN3-202ENST00000335183 SPTAN1Q13813 2472 aaKnown RBP23.68■■□□□ 1.38
CDKN3-202ENST00000335183 CFAP99D6REC4 459 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 ZNF185O15231 689 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 SORBS2O94875 1100 aaKnown RBP23.68■■□□□ 1.38
CDKN3-202ENST00000335183 CRTAMO95727 393 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 ST6GAL1P15907 406 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 ITGALP20701 1170 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 ADRA1AP35348 466 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 RORAP35398 523 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 LMAN1P49257 510 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 PRPSAP1Q14558 356 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 PAPD7Q5XG87 772 aaKnown RBP23.68■■□□□ 1.38
CDKN3-202ENST00000335183 SYTL1Q8IYJ3 562 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 NXPE1Q8N323 547 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 MFRPQ9BY79 579 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 KLHL25Q9H0H3 589 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 PCMTD2Q9NV79 361 aa23.68■■□□□ 1.38
CDKN3-202ENST00000335183 G3BP2Q9UN86 482 aaKnown RBP23.68■■□□□ 1.38
CDKN3-202ENST00000335183 AAR2Q9Y312 384 aaKnown RBP23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms