RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 SCN5AQ14524 2016 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 PFDN6O15212 129 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 FCGR1AP12314 374 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 GALK1P51570 392 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ADARB1P78563 741 aaKnown RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 LAPTM5Q13571 262 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ZBED5Q49AG3 693 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 GTDC1Q4AE62 458 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 USP51Q70EK9 711 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 PATL1Q86TB9 770 aaKnown RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ALDH16A1Q8IZ83 802 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ADGRG2Q8IZP9 1017 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 TMBIM1Q969X1 311 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 MTFMTQ96DP5 389 aaKnown RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 DTNBP1Q96EV8 351 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 CDK5RAP1Q96SZ6 601 aaKnown RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ZNHIT2Q9UHR6 403 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 PTBP2Q9UKA9 531 aaKnown RBP13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 PCDHB3Q9Y5E6 796 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 PCDHGA11Q9Y5H2 935 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 OR51B4Q9Y5P0 310 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 ANAPC1Q9H1A4 1944 aa13.19□□□□□ -0.3
TUBA1B-201ENST00000332858 TYW5A2RUC4 315 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 B3GALT4O96024 378 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 UMPSP11172 480 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 COL6A1P12109 1028 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 TUFMP49411 452 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 MAPK10P53779 464 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SMAD3P84022 425 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 FAM174BQ3ZCQ3 159 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SPATS1Q496A3 300 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 AASDHQ4L235 1098 aaPredicted RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 LRRC23Q53EV4 343 aaPredicted RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 AARS2Q5JTZ9 985 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ABRAXAS1Q6UWZ7 409 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 TMEM150AQ86TG1 271 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 NPAS4Q8IUM7 802 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 C10orf111Q8N326 155 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 OR10A6Q8NH74 314 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ADAMTS16Q8TE57 1224 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ADAMTS19Q8TE59 1207 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 C2orf15Q8WU43 125 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 FIG4Q92562 907 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 PDLIM5Q96HC4 596 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 TBCDQ9BTW9 1192 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 CLPBQ9H078 707 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 CXorf21Q9HAI6 301 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 TIMMDC1Q9NPL8 285 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 MTRRQ9UBK8 725 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 C1orf232A0A0U1RR37 186 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 HMOX2P30519 316 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SHMT2P34897 504 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 MTA1Q13330 715 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 RAB39AQ14964 217 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 NEDD8Q15843 81 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 GPR107Q5VW38 600 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ADAMTSL2Q86TH1 951 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 GPR180Q86V85 440 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ZSWIM9Q86XI8 627 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 MSRB3Q8IXL7 192 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 FBXO30Q8TB52 745 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ALG14Q96F25 216 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 EGFL8Q99944 293 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 MUC13Q9H3R2 512 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 POLR1BQ9H9Y6 1135 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SLC25A37Q9NYZ2 338 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 TMCO1Q9UM00 188 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ARVCFO00192 962 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ARNTLO00327 626 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 PGLSO95336 258 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ELAVL2Q12926 359 aaKnown RBP13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 NFATC2Q13469 925 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SPANXN4Q5MJ08 99 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SUSD1Q6UWL2 747 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 KCTD8Q6ZWB6 473 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 PROSER1Q86XN7 944 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 PHACTR4Q8IZ21 702 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 LRRC43Q8N309 656 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 SDR16C5Q8N3Y7 309 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 ITFG1Q8TB96 612 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 GTF2H4Q92759 462 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 PCDH10Q9P2E7 1040 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 KLQ9UEF7 1012 aa13.18□□□□□ -0.3
TUBA1B-201ENST00000332858 KRT87PA6NCN2 255 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 MBL2P11226 248 aaPredicted RBP13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 CDH1P12830 882 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 CD247P20963 164 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 ARSFP54793 590 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 SP3Q02447 781 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 PWP1Q13610 501 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 ARMC12Q5T9G4 340 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TMEM26Q6ZUK4 368 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TSPAN33Q86UF1 283 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 ZBTB46Q86UZ6 589 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 PDPRQ8NCN5 879 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 PDZD8Q8NEN9 1154 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 TNIP2Q8NFZ5 429 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 OR10Q1Q8NGQ4 319 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 ITFG2Q969R8 447 aa13.17□□□□□ -0.3
TUBA1B-201ENST00000332858 MYO19Q96H55 970 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms