RNA–Protein interactions for RNA: ENST00000331789.9

ACTB-201, Transcript of actin beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ACTB, Length 1,917 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-201ENST00000331789 XKR7Q5GH72 579 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 LDLRAP1Q5SW96 308 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 C6orf163Q5TEZ5 329 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 RAVER1Q8IY67 606 aaKnown RBP17.54■□□□□ 0.4
ACTB-201ENST00000331789 FBXW8Q8N3Y1 598 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 CFAP61Q8NHU2 1237 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 METTL6Q8TCB7 284 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 UBTD2Q8WUN7 234 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 ASB11Q8WXH4 323 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 OPTCQ9UBM4 332 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 CNOT6Q9ULM6 557 aaKnown RBP17.54■□□□□ 0.4
ACTB-201ENST00000331789 ANGPTL3Q9Y5C1 460 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 ST14Q9Y5Y6 855 aa17.54■□□□□ 0.4
ACTB-201ENST00000331789 CFLARO15519 480 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 VPS4BO75351 444 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 RECQL5O94762 991 aaPredicted RBP17.53■□□□□ 0.4
ACTB-201ENST00000331789 SNRPB2P08579 225 aaKnown RBP17.53■□□□□ 0.4
ACTB-201ENST00000331789 SOX9P48436 509 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 HTR6P50406 440 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 CCNG1P51959 295 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 ACTR3P61158 418 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 STX1BP61266 288 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 RCN1Q15293 331 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 CES5AQ6NT32 575 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 EP400NLQ6ZTU2 488 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 MILR1Q7Z6M3 343 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 FUNDC1Q8IVP5 155 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 KCNV2Q8TDN2 545 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 PPP1R16AQ96I34 528 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 SLC12A9Q9BXP2 914 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 WDR41Q9HAD4 459 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 PARVBQ9HBI1 364 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 MRGBPQ9NV56 204 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 ARL15Q9NXU5 204 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 K7ESM1 405 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 KPNA5O15131 536 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 TSPAN6O43657 245 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 SOD1P00441 154 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 OTCP00480 354 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 FTH1P02794 183 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 ANXA5P08758 320 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 PRR35P0CG20 571 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 C6P13671 934 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 GRIA2P42262 883 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 TMEM115Q12893 351 aaPredicted RBP17.53■□□□□ 0.4
ACTB-201ENST00000331789 MAPRE2Q15555 327 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 ERN2Q76MJ5 926 aaKnown RBP17.53■□□□□ 0.4
ACTB-201ENST00000331789 STMN2Q93045 179 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 CCDC124Q96CT7 223 aaKnown RBP17.53■□□□□ 0.4
ACTB-201ENST00000331789 CDRT15Q96T59 188 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 MRPL1Q9BYD6 325 aaKnown RBP17.53■□□□□ 0.4
ACTB-201ENST00000331789 DYRK4Q9NR20 520 aa17.53■□□□□ 0.4
ACTB-201ENST00000331789 ATG2BQ96BY7 2078 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 KRT87PA6NCN2 255 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 K7EPI3 171 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 LZTS3O60299 673 aaPredicted RBP17.52■□□□□ 0.4
ACTB-201ENST00000331789 STK16O75716 305 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 ANP32DO95626 131 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 C8GP07360 202 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 GNAZP19086 355 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 DPP6P42658 865 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 DIO3P55073 304 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 MTTPP55157 894 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 STX5Q13190 355 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 ZXDCQ2QGD7 858 aaPredicted RBP17.52■□□□□ 0.4
ACTB-201ENST00000331789 ITPRIPL2Q3MIP1 535 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 TMEM52BQ4KMG9 183 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 REP15Q6BDI9 236 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 TMEM220Q6QAJ8 160 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 CYP2U1Q7Z449 544 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 TRIM74Q86UV6 250 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 NUS1Q96E22 293 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 SLC45A3Q96JT2 553 aa17.52■□□□□ 0.4
ACTB-201ENST00000331789 ZFC3H1O60293 1989 aaKnown RBP17.52■□□□□ 0.39
ACTB-201ENST00000331789 CCDC85CA6NKD9 419 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 TBX10O75333 385 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 APODP05090 189 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 P2RY2P41231 377 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 CNTN1Q12860 1018 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 MMEL1Q495T6 779 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 IL27RAQ6UWB1 636 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 Q6ZSR9 355 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 SPATA19Q7Z5L4 167 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 MYLK4Q86YV6 388 aaPredicted RBP17.51■□□□□ 0.39
ACTB-201ENST00000331789 PGAM4Q8N0Y7 254 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 MIER2Q8N344 545 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 LILRA3Q8N6C8 439 aaPredicted RBP17.51■□□□□ 0.39
ACTB-201ENST00000331789 ASZ1Q8WWH4 475 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 P2RY13Q9BPV8 354 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 TRMT61BQ9BVS5 477 aaKnown RBP17.51■□□□□ 0.39
ACTB-201ENST00000331789 PRPF19Q9UMS4 504 aaKnown RBP17.51■□□□□ 0.39
ACTB-201ENST00000331789 POMPQ9Y244 141 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 STON1Q9Y6Q2 735 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 C9JVG2 144 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 C1QTNF3-AMACRE9PGA6 284 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 GFYI3L273 518 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 SLCO2B1O94956 709 aa17.51■□□□□ 0.39
ACTB-201ENST00000331789 ENO2P09104 434 aaPredicted RBP17.51■□□□□ 0.39
ACTB-201ENST00000331789 EIF2DP41214 584 aaKnown RBP17.51■□□□□ 0.39
ACTB-201ENST00000331789 PIK3CGP48736 1102 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms