RNA–Protein interactions for RNA: ENST00000331163.10

PDGFB-201, Transcript of platelet derived growth factor subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFB, Length 3,497 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-201ENST00000331163 SFT2D3Q587I9 215 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 OR6Y1Q8NGX8 325 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 CDX2Q99626 313 aaPredicted RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 AARSD1Q9BTE6 412 aaKnown RBP15.63■□□□□ 0.09
PDGFB-201ENST00000331163 C20orf27Q9GZN8 174 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 SPTBP11277 2137 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 DNAH14Q0VDD8 3507 aa15.63■□□□□ 0.09
PDGFB-201ENST00000331163 CHEK2O96017 543 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 PROCP04070 461 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ENO3P13929 434 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 KCNC1P48547 511 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ZNF140P52738 457 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 CTSCP53634 463 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 CENPLQ8N0S6 344 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 SIX5Q8N196 739 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 SLC45A3Q96JT2 553 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 GRIP2Q9C0E4 1043 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ASXL3Q9C0F0 2248 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 H0Y8X5 98 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ALDH1A2O94788 518 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ATP5F1P24539 256 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 NTSR1P30989 418 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 MAP7D1Q3KQU3 841 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ANKS6Q68DC2 871 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 SUSD1Q6UWL2 747 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 MILR1Q7Z6M3 343 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 GALNT4Q8N4A0 578 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 PIWIL2Q8TC59 973 aaKnown RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 MRPL57Q9BQC6 102 aaKnown RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 FAM192AQ9GZU8 254 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 WWP1Q9H0M0 922 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 KCNK13Q9HB14 408 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 CCDC167Q9P0B6 97 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 H3BMM5 538 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 DCNP07585 359 aaKnown RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 TPP2P29144 1249 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 PTGER3P43115 390 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 EPHA5P54756 1037 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 TMEM115Q12893 351 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 PCLAFQ15004 111 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ANGPTL8Q6UXH0 198 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 DNAJC14Q6Y2X3 702 aaPredicted RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 ZBTB2Q8N680 514 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 PTERQ96BW5 349 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 CNBD2Q96M20 576 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 GPR174Q9BXC1 333 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 PHACTR1Q9C0D0 580 aa15.62■□□□□ 0.09
PDGFB-201ENST00000331163 DNAAF2Q9NVR5 837 aaKnown RBP15.62■□□□□ 0.09
PDGFB-201ENST00000331163 F8W8V4 182 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 SOCS5O75159 536 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 PCNAP12004 261 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 RPIAP49247 311 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 OR4D1Q15615 310 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 PAOXQ6QHF9 649 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 ENPP7Q6UWV6 458 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 LIPIQ6XZB0 460 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 APLFQ8IW19 511 aaPredicted RBP15.61■□□□□ 0.09
PDGFB-201ENST00000331163 SLC44A3Q8N4M1 653 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 CLHC1Q8NHS4 586 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 FAM126AQ9BYI3 521 aaPredicted RBP15.61■□□□□ 0.09
PDGFB-201ENST00000331163 LMAN1LQ9HAT1 526 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 H3BM21 787 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 ECI2O75521 394 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 DGKAP23743 735 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 LTBRP36941 435 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 INHBCP55103 352 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 STX1BP61266 288 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 NAE1Q13564 534 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 C6orf10Q5SRN2 563 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 RBM44Q6ZP01 1051 aaKnown RBP15.61■□□□□ 0.09
PDGFB-201ENST00000331163 KIAA0408Q6ZU52 694 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 PELI3Q8N2H9 469 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 TM7SF3Q9NS93 570 aa15.61■□□□□ 0.09
PDGFB-201ENST00000331163 IPO13O94829 963 aaKnown RBP15.6■□□□□ 0.09
PDGFB-201ENST00000331163 ZNF37AP17032 561 aaPredicted RBP15.6■□□□□ 0.09
PDGFB-201ENST00000331163 NELFEP18615 380 aaKnown RBP15.6■□□□□ 0.09
PDGFB-201ENST00000331163 NSG1P42857 185 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 BDKRB1P46663 353 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 GNPDA1P46926 289 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 CYP4F2P78329 520 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 ELP6Q0PNE2 266 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 DMC1Q14565 340 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 RAB3IL1Q8TBN0 382 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 SKA1Q96BD8 255 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 TRIB3Q96RU7 358 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 COG4Q9H9E3 785 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 ATXN10Q9UBB4 475 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 MBD1Q9UIS9 605 aaPredicted RBP15.6■□□□□ 0.09
PDGFB-201ENST00000331163 A0A087X1B8 175 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 A8MT66 165 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 WDR47O94967 919 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 C1SP09871 688 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 LIPMQ5VYY2 423 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 PHYKPLQ8IUZ5 450 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 PLA2G15Q8NCC3 412 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 OR10G6Q8NH81 332 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 IL17FQ96PD4 163 aa15.6■□□□□ 0.09
PDGFB-201ENST00000331163 NOL11Q9H8H0 719 aaKnown RBP15.6■□□□□ 0.09
PDGFB-201ENST00000331163 CARS2Q9HA77 564 aaKnown RBP15.6■□□□□ 0.09
PDGFB-201ENST00000331163 ARNT2Q9HBZ2 717 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms