RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 RNF208Q9H0X6 261 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.31□□□□□ -0.12
TPM3-206ENST00000330188 WWOXQ9NZC7 414 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 COMMD3-BMI1R4GMX3 469 aa14.31□□□□□ -0.12
TPM3-206ENST00000330188 PDLIM1O00151 329 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 ARNTLO00327 626 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 TGM5O43548 720 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 GJA1P17302 382 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 HRH2P25021 359 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 SOX11P35716 441 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 GDF5P43026 501 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 CCT8P50990 548 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 ATP6AP1Q15904 470 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 AAK1Q2M2I8 961 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 SLC5A9Q2M3M2 681 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 SULT1C3Q6IMI6 304 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 ADGRG2Q8IZP9 1017 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 PAPD5Q8NDF8 572 aaKnown RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 NUDT8Q8WV74 236 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 TFAP2CQ92754 450 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 DGCR14Q96DF8 476 aaKnown RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 CENPNQ96H22 339 aaPredicted RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 PPP3R2Q96LZ3 170 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 LATS2Q9NRM7 1088 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 OPTCQ9UBM4 332 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 HELZP42694 1942 aaKnown RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 VILLO15195 856 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 CHRM1P11229 460 aaPredicted RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 CCL5P13501 91 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 MSH3P20585 1137 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 JAK1P23458 1154 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 PIK3CGP48736 1102 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 OR4D2P58180 307 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 SNRPD1P62314 119 aaKnown RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 PLOD1Q02809 727 aaPredicted RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 KIAA0040Q15053 153 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 RBM44Q6ZP01 1051 aaKnown RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 PRR23BQ6ZRT6 265 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 RNF165Q6ZSG1 346 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 TPRG1Q6ZUI0 275 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 RBM38Q9H0Z9 239 aaKnown RBP14.3□□□□□ -0.12
TPM3-206ENST00000330188 RDH14Q9HBH5 336 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 OLAHQ9NV23 265 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 ANAPC2Q9UJX6 822 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 NEUROG3Q9Y4Z2 214 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 ANGPTL3Q9Y5C1 460 aa14.3□□□□□ -0.12
TPM3-206ENST00000330188 ABHD14A-ACY1A0A1B0GW23 586 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 K7EPI3 171 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 LEFTY2O00292 366 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 IFRD1O00458 451 aaPredicted RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 ACOX3O15254 700 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 UMPSP11172 480 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 FCGR1AP12314 374 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 NELFEP18615 380 aaKnown RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 VARSP26640 1264 aaKnown RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 CA8P35219 290 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 RFC2P35250 354 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 NSG1P42857 185 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 DGKQP52824 942 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 PTPN5P54829 565 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 RPL38P63173 70 aaKnown RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 SELPLGQ14242 412 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 MYLK3Q32MK0 819 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 AASDHQ4L235 1098 aaPredicted RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 LRRC66Q68CR7 880 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 SPRED1Q7Z699 444 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 PROSER1Q86XN7 944 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 CMTM8Q8IZV2 173 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 ECHDC3Q96DC8 303 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 SCRN2Q96FV2 425 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 PPM1MQ96MI6 270 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 C9orf16Q9BUW7 83 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 NTMT1Q9BV86 223 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 ZBP1Q9H171 429 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 PIF1Q9H611 641 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 RPF2Q9H7B2 306 aaKnown RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 PNPLA3Q9NST1 481 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 TRPS1Q9UHF7 1281 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 PPIL1Q9Y3C6 166 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 TRAV19A0A0A6YYK7 116 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 A0A1W2PRU2 124 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 KANSL1LA0AUZ9 987 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 H3BNH8 94 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 FFAR3O14843 346 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 GPR42O15529 346 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 RGS14O43566 566 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 H6PDO95479 791 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 LRG1P02750 347 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 SLC2A4P14672 509 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 VEGFBP49765 207 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 CRY1Q16526 586 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 PLA2G4EQ3MJ16 856 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 TTLL9Q3SXZ7 439 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 KRT80Q6KB66 452 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 METTL2BQ6P1Q9 378 aaKnown RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 C22orf39Q6P5X5 142 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 MBOAT1Q6ZNC8 495 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 RALGPS2Q86X27 583 aaPredicted RBP14.29□□□□□ -0.12
TPM3-206ENST00000330188 CGREF1Q99674 301 aa14.29□□□□□ -0.12
TPM3-206ENST00000330188 SMG9Q9H0W8 520 aaKnown RBP14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms