RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 SRP72O76094 671 aaKnown RBP16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 SOD1P00441 154 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 SERPINE1P05121 402 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 MYL2P10916 166 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 NME1P15531 152 aaKnown RBP16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 JUNDP17535 347 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 DCDC1P59894 354 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 NAA20P61599 178 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 YPEL5P62699 121 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 PPARDQ03181 441 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 ALG11Q2TAA5 492 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 GLRX5Q86SX6 157 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 PARGQ86W56 976 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 MARCH9Q86YJ5 346 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 NKAPQ8N5F7 415 aaKnown RBP16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 GBP7Q8N8V2 638 aaPredicted RBP16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 FAM174AQ8TBP5 190 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 HEXDCQ8WVB3 486 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 NUS1Q96E22 293 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 C1QTNF7Q9BXJ2 289 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 TRIM55Q9BYV6 548 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 CLPBQ9H078 707 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 MRPL40Q9NQ50 206 aaKnown RBP16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 KCTD5Q9NXV2 234 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 KLHL42Q9P2K6 505 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 EPG5Q9HCE0 2579 aa16.17■□□□□ 0.18
PDLIM1-201ENST00000329399 GLYATL1P3A0A0U1RQE8 302 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 OR51F1A6NGY5 319 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 TMEM114B3SHH9 223 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PRMT5O14744 637 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 SIGLEC6O43699 453 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 TRIM13O60858 407 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 VPS26AO75436 327 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 WISP3O95389 354 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 FTH1P19P0C7X4 201 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PKMP14618 531 aaKnown RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 SAT1P21673 171 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 HK2P52789 917 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 THOP1P52888 689 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 ATP6V0D1P61421 351 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 NFATC2Q13469 925 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 SMAD1Q15797 465 aaKnown RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 ENPP7Q6UWV6 458 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 ZYG11AQ6WRX3 759 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CEP97Q8IW35 865 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 NRSN1Q8IZ57 195 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CENPLQ8N0S6 344 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CHCHD4Q8N4Q1 142 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 OXR1Q8N573 874 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 ZNF548Q8NEK5 533 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 RHEBL1Q8TAI7 183 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 OR1E3Q8WZA6 343 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 KCNJ9Q92806 393 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 ZNF106Q9H2Y7 1883 aaKnown RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 TMCO1Q9UM00 188 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 LY6G6EA0A0G2JKS1 128 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 WDR91A4D1P6 747 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CCL22O00626 93 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PHGDHO43175 533 aaKnown RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 SNNO75324 88 aaPredicted RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PRAMEF1O95521 474 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 RALBP11234 206 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 BGNP21810 368 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CLDN6P56747 220 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 FOXC1Q12948 553 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PDAP1Q13442 181 aaKnown RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PTPRCAPQ14761 206 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 NFATC4Q14934 902 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PCLAFQ15004 111 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CHI3L2Q15782 390 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 RBM20Q5T481 1227 aaKnown RBP16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 LRRC8EQ6NSJ5 796 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 MACC1Q6ZN28 852 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 TAS2R42Q7RTR8 314 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 RD3Q7Z3Z2 195 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CRLF3Q8IUI8 442 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 SLC22A9Q8IVM8 553 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PHACTR4Q8IZ21 702 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PPP4R1Q8TF05 950 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 PDXPQ96GD0 296 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 SCYL1Q96KG9 808 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 GPR78Q96P69 363 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 FGF22Q9HCT0 170 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 IL26Q9NPH9 171 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 OXSMQ9NWU1 459 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 CRYL1Q9Y2S2 319 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 U3KQA8 63 aa16.16■□□□□ 0.18
PDLIM1-201ENST00000329399 UBA6A0AVT1 1052 aaPredicted RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 CASC3O15234 703 aaKnown RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 YKT6O15498 198 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 HYAL3O43820 417 aaPredicted RBP16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 CCDC166P0CW27 439 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 BPIP17213 487 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 ABCG1P45844 678 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 SPINT3P49223 89 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 DNAJB13P59910 316 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 SEMA3AQ14563 771 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 PROX2Q3B8N5 592 aa16.15■□□□□ 0.18
PDLIM1-201ENST00000329399 CCDC157Q569K6 752 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms