RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 PTPRNQ16849 979 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 ZNF362Q5T0B9 420 aaPredicted RBP16.47■□□□□ 0.23
SSH1-201ENST00000326470 LDLRAD1Q5T700 205 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 MCOLN3Q8TDD5 553 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 SLC13A3Q8WWT9 602 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 STARD8Q92502 1023 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 FAM162AQ96A26 154 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 SLC10A4Q96EP9 437 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 ANKMY1Q9P2S6 941 aa16.47■□□□□ 0.23
SSH1-201ENST00000326470 CXCR6O00574 342 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 MAN1A2O60476 641 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 ANGPTL1O95841 491 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 ZNF140P52738 457 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 TBX4P57082 545 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 PPP1R8Q12972 351 aaKnown RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 AP5B1Q2VPB7 878 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 PGS1Q32NB8 556 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 DEPDC1Q5TB30 811 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 AFTPHQ6ULP2 937 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 ADCK1Q86TW2 530 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 ABI1Q8IZP0 508 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 ARL10Q8N8L6 244 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 CNIH3Q8TBE1 160 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 DYNC2LI1Q8TCX1 351 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 NSMCE3Q96MG7 304 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 KLHL25Q9H0H3 589 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 RMND5AQ9H871 391 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 POLR3HQ9Y535 204 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 BCKDKO14874 412 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 RAMP2O60895 175 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 VPS26AO75436 327 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 OXSR1O95747 527 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 ITGAMP11215 1152 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 FSHRP23945 695 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 CD6P30203 668 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 GRK3P35626 688 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 SERINC3Q13530 473 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 KCNJ8Q15842 424 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 RFTN2Q52LD8 501 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 AGMOQ6ZNB7 445 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 P2RY8Q86VZ1 359 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 SPATA2LQ8IUW3 424 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 GTF2H4Q92759 462 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 IGSF8Q969P0 613 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 REXO5Q96IC2 774 aaKnown RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 ZNF300Q96RE9 604 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 HBEGFQ99075 208 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 IKZF5Q9H5V7 419 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 MAGIXQ9H6Y5 334 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 SCUBE2Q9NQ36 999 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 SCHIP1Q9P0W5 487 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 NIPSNAP3AQ9UFN0 247 aaPredicted RBP16.46■□□□□ 0.23
SSH1-201ENST00000326470 ORC6Q9Y5N6 252 aa16.46■□□□□ 0.23
SSH1-201ENST00000326470 DOCK4Q8N1I0 1966 aa16.46■□□□□ 0.22
SSH1-201ENST00000326470 PFDN6O15212 129 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 NTRK1P04629 796 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 GJA5P36382 358 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 VBP1P61758 197 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 IL5RAQ01344 420 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 TSPY1Q01534 308 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 RAPSNQ13702 412 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 ZNF235Q14590 738 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PHKG1Q16816 387 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PLA2G4EQ3MJ16 856 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PARP15Q460N3 678 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 SYT6Q5T7P8 510 aaPredicted RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 OVOS1Q6IE37 1185 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 HOMEZQ8IX15 550 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 SIDT2Q8NBJ9 832 aaKnown RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 EEF1AKMT1Q8WVE0 214 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 TRIB3Q96RU7 358 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 BTBD2Q9BX70 525 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 ALOXE3Q9BYJ1 711 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 DUSP21Q9H596 190 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 DCAF13Q9NV06 445 aaKnown RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 ERVK-18Q9QC07 812 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 TRMT6Q9UJA5 497 aaKnown RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 PCDHGA10Q9Y5H3 936 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PATJQ8NI35 1801 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 C17orf102A2RUQ5 167 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PRMT5O14744 637 aaPredicted RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 MYO1DO94832 1006 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 RETP07949 1114 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 SERPINF2P08697 491 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PKMP14618 531 aaKnown RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 ALDH4A1P30038 563 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 ARL1P40616 181 aaPredicted RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 IL2P60568 153 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 LSM3P62310 102 aaKnown RBP16.45■□□□□ 0.22
SSH1-201ENST00000326470 GRB14Q14449 540 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 PON2Q15165 354 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 NPTX1Q15818 432 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 FBXL22Q6P050 247 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 GPR142Q7Z601 462 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 DSG4Q86SJ6 1040 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 GPR149Q86SP6 731 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 HIPK1Q86Z02 1210 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 ATP6V0D2Q8N8Y2 350 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 OR4K2Q8NGD2 314 aa16.45■□□□□ 0.22
SSH1-201ENST00000326470 LINGO1Q96FE5 620 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms