RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 CFAP97Q9P2B7 532 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 SPATA31A1Q5TZJ5 1347 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 C1QTNF3-AMACRE9PGA6 284 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 H3BNH8 94 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 C2orf80Q0P641 193 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 IKBKEQ14164 716 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 BATFQ16520 125 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 C9orf64Q5T6V5 341 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 XKRXQ6PP77 449 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MYO19Q96H55 970 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ACSS3Q9H6R3 686 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PPM1HQ9ULR3 514 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 TRPM6Q9BX84 2022 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 AMZ1Q400G9 498 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 LACTB2Q53H82 288 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 ACSBG2Q5FVE4 666 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PIGXQ8TBF5 258 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 LENG8Q96PV6 779 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 TMED9Q9BVK6 235 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 OSBPL7Q9BZF2 842 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 NXF3Q9H4D5 531 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 ANXA2P2A6NMY6 339 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 DNAJA2O60884 412 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ANXA2P07355 339 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 TUBA1BP68363 451 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 SLC18A2Q05940 514 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ARSHQ5FYA8 562 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 TUBA1AQ71U36 451 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 FAM110BQ8TC76 370 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 CENPNQ96H22 339 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 LRRC4CQ9HCJ2 640 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 FBXW2Q9UKT8 454 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 CPS1P31327 1500 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PXDNLA1KZ92 1463 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 PLK4O00444 970 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 NT5EP21589 574 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 MAT2AP31153 395 aaKnown RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 MAGEA11P43364 429 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 RFX5P48382 616 aaPredicted RBP7.81□□□□□ -1.16
CIITA-201ENST00000324288 VLDLRP98155 873 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ELP6Q0PNE2 266 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 NKX2-3Q8TAU0 364 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 TWIST2Q8WVJ9 160 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ITFG2Q969R8 447 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 SLC35C1Q96A29 364 aa7.81□□□□□ -1.16
CIITA-201ENST00000324288 ZNF99A8MXY4 864 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 OR1I1O60431 355 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 INMTO95050 263 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CSF2P04141 144 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 UGT2B4P06133 528 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CPN2P22792 545 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 ZNF143P52747 638 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 ILF2Q12905 390 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 NTRK3Q16288 839 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 BEND5Q7L4P6 421 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 NRSN1Q8IZ57 195 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SRFBP1Q8NEF9 429 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 KCNN2Q9H2S1 579 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SLC39A1Q9NY26 324 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 DICER1Q9UPY3 1922 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 ACSL1P33121 698 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SLC26A2P50443 739 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 WNT3AP56704 352 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SLC3A1Q07837 685 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 HSPB3Q12988 150 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 LSM12Q3MHD2 195 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 NADK2Q4G0N4 442 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 INO80EQ8NBZ0 244 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 IL4I1Q96RQ9 567 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 RIOK2Q9BVS4 552 aaKnown RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 SACM1LQ9NTJ5 587 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 POLR3BQ9NW08 1133 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 SSX5O60225 188 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 NUDT17P0C025 328 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 IDO1P14902 403 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CD52P31358 61 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SYT16Q17RD7 645 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SCGB2B2Q4G0G5 96 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 BRMS1LQ5PSV4 323 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 TMEM198Q66K66 360 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 ANKRD26P1Q6NSI1 321 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 USP43Q70EL4 1123 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 LRRC70Q7Z2Q7 622 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CFAP206Q8IYR0 622 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SLC43A3Q8NBI5 491 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 SLC44A1Q8WWI5 657 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 KLK6Q92876 244 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 COQ8BQ96D53 544 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 FRMPD4Q14CM0 1322 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 BHMG1C9JSJ3 638 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 KMOO15229 486 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 PAPSS2O95340 614 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 THEGLP0DJG4 465 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 RTL4Q6ZR62 310 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 OR2L8Q8NGY9 312 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 IKZF4Q9H2S9 585 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 RIMKLBQ9ULI2 386 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 C13orf42A0A1B0GVH6 325 aa7.8□□□□□ -1.16
CIITA-201ENST00000324288 CACNB4O00305 520 aaPredicted RBP7.8□□□□□ -1.16
CIITA-201ENST00000324288 RPLP0P05388 317 aaKnown RBP7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms