RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 EMX2Q04743 252 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 TUBA3CQ13748 450 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 SH2D5Q6ZV89 423 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 SMYD1Q8NB12 490 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 BIRC8Q96P09 236 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 SOX17Q9H6I2 414 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-201ENST00000323668 NBNO60934 754 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 ABCB7O75027 752 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 HAPLN1P10915 354 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-201ENST00000323668 HSD17B1P14061 328 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 SEPHS1P49903 392 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 AP1S1P61966 158 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 RAB39AQ14964 217 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 ATP6AP1Q15904 470 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 ZBTB6Q15916 424 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 ERAP2Q6P179 960 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 DOK6Q6PKX4 331 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 BLOC1S3Q6QNY0 202 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 GRIN3AQ8TCU5 1115 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 NLNQ9BYT8 704 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 TMEM165Q9HC07 324 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 TRIM17Q9Y577 477 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 PRSS51A0A1B0GVH4 220 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 LRRC14BA6NHZ5 514 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 RFC2P35250 354 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 INHBEP58166 350 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 GRIK2Q13002 908 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 GRB14Q14449 540 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 SPRYD7Q5W111 196 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 OR4F6Q8NGB9 312 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 AURKBQ96GD4 344 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-201ENST00000323668 RANBP9Q96S59 729 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 ANKRD60Q9BZ19 345 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 ATG10Q9H0Y0 220 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 BRD9Q9H8M2 597 aa14.51□□□□□ -0.09
TCOF1-201ENST00000323668 H0YAE9 185 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 NME4O00746 187 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 PTGESO14684 152 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 MAGP20916 626 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 RPL3P39023 403 aaKnown RBP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 AGTR2P50052 363 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ACOX1Q15067 660 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 COLGALT2Q8IYK4 626 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ANKRD49Q8WVL7 239 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TMEM40Q8WWA1 233 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 IGSF5Q9NSI5 407 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 OGDHLQ9ULD0 1010 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ANGPT4Q9Y264 503 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 SLC22A1O15245 554 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 CLPXO76031 633 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 CYP11A1P05108 521 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 MYCLP1P12525 358 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 CTSKP43235 329 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 STT3AP46977 705 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TGFBIQ15582 683 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 DENND5AQ6IQ26 1287 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TMIGD2Q96BF3 282 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 NDEL1Q9GZM8 345 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TOR3AQ9H497 397 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 NMUR1Q9HB89 426 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ANKRD66B4E2M5 251 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 QSOX1O00391 747 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 AIREO43918 545 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 C8BP07358 591 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 CCL14Q16627 93 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ZNF789Q5FWF6 425 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 LCN8Q6JVE9 175 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 FNDC8Q8TC99 324 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ASZ1Q8WWH4 475 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ZNF597Q96LX8 424 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 Q96MT0 163 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TBCCD1Q9NVR7 557 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ARMC1Q9NVT9 282 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 SAGE2PA6NJ88 616 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 PRAMEF11O60813 436 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 EOMESO95936 686 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 IL7RP16871 459 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TXNL4AP83876 142 aaKnown RBP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 TRIQKQ629K1 86 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 R3HCC1LQ7Z5L2 792 aaKnown RBP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 CLEC14AQ86T13 490 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ST13P5Q8NFI4 369 aaPredicted RBP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 ENKURQ8TC29 256 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 STON2Q8WXE9 905 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 UPF1Q92900 1129 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 C8orf48Q96LL4 319 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 UBAP1Q9NZ09 502 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 SPG21Q9NZD8 308 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 PRKAG2Q9UGJ0 569 aa14.5□□□□□ -0.09
TCOF1-201ENST00000323668 FCF1Q9Y324 198 aaKnown RBP14.5□□□□□ -0.09
TCOF1-201ENST00000323668 SH3PXD2BA1X283 911 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 JUNP05412 331 aaKnown RBP14.49□□□□□ -0.09
TCOF1-201ENST00000323668 TSPAN19P0C672 248 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 HTR1EP28566 365 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 SLC16A1P53985 500 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 NPTX1Q15818 432 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 KCNA10Q16322 511 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 FUT10Q6P4F1 479 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 TRAPPC5Q8IUR0 188 aa14.49□□□□□ -0.09
TCOF1-201ENST00000323668 CMTR2Q8IYT2 770 aaKnown RBP14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms