RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 CTSCP53634 463 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 RBBP7Q16576 425 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 C2orf27AQ580R0 203 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 CHRDL2Q6WN34 429 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 UBE2R2Q712K3 238 aaPredicted RBP17.49■□□□□ 0.39
RAB39A-201ENST00000320578 AADATQ8N5Z0 425 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 HIST1H2AHQ96KK5 128 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 HIST1H2AJQ99878 128 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 TMEM79Q9BSE2 394 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 H2AFJQ9BTM1 129 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 WWOXQ9NZC7 414 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 COQ6Q9Y2Z9 468 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 ASB1Q9Y576 335 aa17.49■□□□□ 0.39
RAB39A-201ENST00000320578 PIKFYVEQ9Y2I7 2098 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 C17orf113A0A1B0GUU1 675 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 ANTXRLA6NF34 631 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 K7EPI3 171 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 GLULP15104 373 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 RAP1GDS1P52306 607 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 FOXA1P55317 472 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 RPS14P62263 151 aaKnown RBP17.48■□□□□ 0.39
RAB39A-201ENST00000320578 BOP1Q14137 746 aaKnown RBP17.48■□□□□ 0.39
RAB39A-201ENST00000320578 STARD3Q14849 445 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 TMEM196Q5HYL7 178 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 TMEM198Q66K66 360 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 RAET1GQ6H3X3 334 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 OGFOD2Q6N063 350 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 TMEM220Q6QAJ8 160 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 ADGRG6Q86SQ4 1221 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 PARP9Q8IXQ6 854 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 MCOLN3Q8TDD5 553 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 MCUR1Q96AQ8 359 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 COX14Q96I36 57 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 CATSPER2Q96P56 530 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 NTMT1Q9BV86 223 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 TUBB1Q9H4B7 451 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 NOL11Q9H8H0 719 aaKnown RBP17.48■□□□□ 0.39
RAB39A-201ENST00000320578 OPTCQ9UBM4 332 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 SCML1Q9UN30 329 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 CKAP5Q14008 2032 aa17.48■□□□□ 0.39
RAB39A-201ENST00000320578 OR2AG2A6NM03 316 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 OR7A17O14581 309 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 LIN7AO14910 233 aaPredicted RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PIP5K1BO14986 540 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 LILRB5O75023 590 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PSIP1O75475 530 aaKnown RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 STK16O75716 305 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 TM7SF2O76062 418 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 GUCA1CO95843 209 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PRR35P0CG20 571 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 TIE1P35590 1138 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 CPA2P48052 419 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ACADVLP49748 655 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 TAS2R38P59533 333 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ERVPABLB-1P60509 514 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 MAPRE2Q15555 327 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 XKR7Q5GH72 579 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 WASHC2DQ5SRD0 308 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 LRRC70Q7Z2Q7 622 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 VRK3Q8IV63 474 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PLCD3Q8N3E9 789 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 TMEM159Q96B96 161 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 MSANTD3Q96H12 275 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 C3orf30Q96M34 536 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 AKTIPQ9H8T0 292 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 A0A1B0GTL3 188 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PABPN1LA6NDY0 278 aaKnown RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 INPP4BO15327 924 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 KATNA1O75449 491 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PGM1P36871 562 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 HSPA7P48741 367 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 MRPS21P82921 87 aaKnown RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 GRIK2Q13002 908 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 TRAF3Q13114 568 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 GTF2H3Q13889 308 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 CYLC2Q14093 348 aaPredicted RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 PTK2BQ14289 1009 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ZRSR2Q15696 482 aaKnown RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 FBXO48Q5FWF7 155 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ZNF648Q5T619 568 aaPredicted RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 SPATA19Q7Z5L4 167 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 SLC22A15Q8IZD6 547 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 HDDC3Q8N4P3 179 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 FBXO15Q8NCQ5 510 aaPredicted RBP17.47■□□□□ 0.39
RAB39A-201ENST00000320578 FAM13CQ8NE31 585 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ESAMQ96AP7 390 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 HIC2Q96JB3 615 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 SLC32A1Q9H598 525 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 IPPKQ9H8X2 491 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ZDHHC4Q9NPG8 344 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 ARL15Q9NXU5 204 aa17.47■□□□□ 0.39
RAB39A-201ENST00000320578 EBLN1P0CF75 366 aa17.46■□□□□ 0.39
RAB39A-201ENST00000320578 LBPP18428 481 aa17.46■□□□□ 0.39
RAB39A-201ENST00000320578 PRDX3P30048 256 aaKnown RBP17.46■□□□□ 0.39
RAB39A-201ENST00000320578 WASP42768 502 aa17.46■□□□□ 0.39
RAB39A-201ENST00000320578 SYTL3Q4VX76 610 aa17.46■□□□□ 0.39
RAB39A-201ENST00000320578 PNCKQ6P2M8 343 aa17.46■□□□□ 0.39
RAB39A-201ENST00000320578 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP17.46■□□□□ 0.39
RAB39A-201ENST00000320578 KLHDC8AQ8IYD2 350 aa17.46■□□□□ 0.39
RAB39A-201ENST00000320578 OR52B6Q8NGF0 335 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms