RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 LPOP22079 712 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SHMT2P34897 504 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CYP4F8P98187 520 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 RAD51Q06609 339 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SELENBP1Q13228 472 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 FUT11Q495W5 492 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 DNAJB7Q7Z6W7 309 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CCDC138Q96M89 665 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF641Q96N77 438 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF347Q96SE7 839 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 HGH1Q9BTY7 390 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 RNF208Q9H0X6 261 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 POLE4Q9NR33 117 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SMPD3Q9NY59 655 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 A0A0J9YYE9 177 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 XYLBO75191 536 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 APLP1P51693 650 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 PLA2G16P53816 162 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CLCQ05315 142 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CARTPTQ16568 116 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 SETMARQ53H47 684 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 PYCR3Q53H96 274 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CXorf57Q6NSI4 855 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 USP51Q70EK9 711 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CLYBLQ8N0X4 340 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 CDYL2Q8N8U2 506 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 STON2Q8WXE9 905 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 TMEM169Q96HH4 297 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 IGSF21Q96ID5 467 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 TSEN34Q9BSV6 310 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 MRPL9Q9BYD2 267 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 TUBB1Q9H4B7 451 aa15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 NLE1Q9NVX2 485 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 EVLQ9UI08 416 aaPredicted RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 EIF2B4Q9UI10 523 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 TRMT6Q9UJA5 497 aaKnown RBP15.32■□□□□ 0.04
SHROOM1-201ENST00000319854 A6NL46 340 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 PFDN6O15212 129 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 MYO1DO94832 1006 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 IL10P22301 178 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 CSKP41240 450 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF461Q8TAF7 563 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ATOH8Q96SQ7 321 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 TUBA1CQ9BQE3 449 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC25A23Q9BV35 468 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 RAD21L1Q9H4I0 556 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ELAC1Q9H777 363 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 CD320Q9NPF0 282 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 CMTM6Q9NX76 183 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 MTRRQ9UBK8 725 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 CKMP06732 381 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 NCK1P16333 377 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 RPS9P46781 194 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 PIK3CGP48736 1102 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ADARB1P78563 741 aaKnown RBP15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 CCNYL2Q5T2Q4 361 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC8B1Q6J4K2 584 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ZNF773Q6PK81 442 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 LARP4Q71RC2 724 aaKnown RBP eCLIP15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 APCDD1Q8J025 514 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 STAG3L4Q8TBR4 150 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ZFP90Q8TF47 636 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 ZUFSPQ96AP4 578 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 MYRFLQ96LU7 910 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 PSD2Q9BQI7 771 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 GPN2Q9H9Y4 310 aaPredicted RBP15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 PKD2L2Q9NZM6 624 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 CLEC4EQ9ULY5 219 aa15.31■□□□□ 0.04
SHROOM1-201ENST00000319854 SNX2O60749 519 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 BCAS1O75363 584 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 EPOP01588 193 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 TLE2Q04725 743 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 MAPRE2Q15555 327 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 SLC14A2Q15849 920 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 AFTPHQ6ULP2 937 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 ITIH5Q86UX2 942 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 MYLIPQ8WY64 445 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 FKBP10Q96AY3 582 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 FAR2Q96K12 515 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 BOCQ9BWV1 1114 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 APOL5Q9BWW9 433 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 CLDN25C9JDP6 229 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 RSL1D1O76021 490 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 TRIM16O95361 564 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 CD160O95971 181 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 NKX2-5P52952 324 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 IRAK1BP1Q5VVH5 260 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 FUBP1Q96AE4 644 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 ADGRE3Q9BY15 652 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 ATP11BQ9Y2G3 1177 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 MAGED1Q9Y5V3 778 aaPredicted RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 FRMPD3Q5JV73 1810 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 ILVBLA1L0T0 632 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 INPP4BO15327 924 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 PKMP14618 531 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 TGM1P22735 817 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 PSMA4P25789 261 aaKnown RBP15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 CA5AP35218 305 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 TPTEP56180 551 aa15.3■□□□□ 0.04
SHROOM1-201ENST00000319854 VEPH1Q14D04 833 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms