RNA–Protein interactions for RNA: ENST00000314355.6

CKS2-201, Transcript of CDC28 protein kinase regulatory subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS2, Length 613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2-201ENST00000314355 OLIG2Q13516 323 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 POU6F1Q14863 301 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 DEFB109BQ30KR1 87 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 LYPLAL1Q5VWZ2 237 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 SERPINA9Q86WD7 417 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 CCDC89Q8N998 374 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 MAIP1Q8WWC4 291 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 LCN9Q8WX39 176 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 N4BP2L2Q92802 583 aaPredicted RBP12.38□□□□□ -0.43
CKS2-201ENST00000314355 DESI2Q9BSY9 194 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 TSSK1BQ9BXA7 367 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 MVB12BQ9H7P6 319 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 FGF21Q9NSA1 209 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 KCND1Q9NSA2 647 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 STARD5Q9NSY2 213 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 NLE1Q9NVX2 485 aaPredicted RBP12.38□□□□□ -0.43
CKS2-201ENST00000314355 SMARCAL1Q9NZC9 954 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 SLC24A2Q9UI40 661 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 CROTQ9UKG9 612 aa12.38□□□□□ -0.43
CKS2-201ENST00000314355 SDK2Q58EX2 2172 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 IGHV5-51A0A0C4DH38 117 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 PIPSLA2A3N6 862 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 HEATR9A2RTY3 570 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 GSAPA4D1B5 854 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 C21orf140B9A014 251 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 AP3B1O00203 1094 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 DDX3YO15523 660 aaKnown RBP12.37□□□□□ -0.43
CKS2-201ENST00000314355 LDB2O43679 373 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 METTL18O95568 372 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 RECKO95980 971 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 FTH1P02794 183 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 OR56A5P0C7T3 313 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 POLR2CP19387 275 aaPredicted RBP12.37□□□□□ -0.43
CKS2-201ENST00000314355 ZNF140P52738 457 aaPredicted RBP12.37□□□□□ -0.43
CKS2-201ENST00000314355 TUBB4BP68371 445 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 TUBB2AQ13885 445 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 ERV3-1Q14264 604 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 RPS6KA1Q15418 735 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 DENND5AQ6IQ26 1287 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 TMEM126BQ8IUX1 230 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 GPR150Q8NGU9 434 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 C9orf43Q8TAL5 461 aaPredicted RBP12.37□□□□□ -0.43
CKS2-201ENST00000314355 HES6Q96HZ4 224 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 SLC41A2Q96JW4 573 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 DNAJC1Q96KC8 554 aaKnown RBP12.37□□□□□ -0.43
CKS2-201ENST00000314355 GORASP1Q9BQQ3 440 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 TUBB2BQ9BVA1 445 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 GPR87Q9BY21 358 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 TWSG1Q9GZX9 223 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 COG4Q9H9E3 785 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 LHX9Q9NQ69 397 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 C1GALT1Q9NS00 363 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 IL17BQ9UHF5 180 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 SERTAD3Q9UJW9 196 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 POLHQ9Y253 713 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 COL6A6A6NMZ7 2263 aa12.37□□□□□ -0.43
CKS2-201ENST00000314355 MKRN2OSH3BPM6 223 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 LIN7AO14910 233 aaPredicted RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 CPNE3O75131 537 aaKnown RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 SCRG1O75711 98 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 WISP1O95388 367 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 MSNP26038 577 aaKnown RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 ITIH4Q14624 930 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 SYTL3Q4VX76 610 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 KCTD11Q693B1 232 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 CAPRIN2Q6IMN6 1127 aaKnown RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 C4orf22Q6V702 233 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 CERS6Q6ZMG9 384 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 NLRP9Q7RTR0 991 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 D2HGDHQ8N465 521 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 TAB3Q8N5C8 712 aaPredicted RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 SPDYE1Q8NFV5 336 aaPredicted RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 SLC35B2Q8TB61 432 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 ELMO1Q92556 727 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 TFGQ92734 400 aaPredicted RBP12.36□□□□□ -0.43
CKS2-201ENST00000314355 CLMPQ9H6B4 373 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 SEMA5BQ9P283 1151 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 POLG2Q9UHN1 485 aa12.36□□□□□ -0.43
CKS2-201ENST00000314355 CDC14CA4D256 554 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 GOLGA6L3A6NEY3 463 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 C2orf74A8MZ97 194 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 CCL22O00626 93 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 ARHGAP6O43182 974 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 CREG1O75629 220 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 NTRK1P04629 796 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 EBLN1P0CF75 366 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 FOLR1P15328 257 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 ZNF28P17035 718 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 ITGB6P18564 788 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 ADRA1DP25100 572 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 CA5AP35218 305 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 PREPP48147 710 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 PRAMEP78395 509 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 KLF1Q13351 362 aaPredicted RBP12.35□□□□□ -0.43
CKS2-201ENST00000314355 MSLNQ13421 630 aaPredicted RBP12.35□□□□□ -0.43
CKS2-201ENST00000314355 DNASE1L3Q13609 305 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 FASTKD1Q53R41 847 aaKnown RBP12.35□□□□□ -0.43
CKS2-201ENST00000314355 DUS1LQ6P1R4 473 aaKnown RBP12.35□□□□□ -0.43
CKS2-201ENST00000314355 GSTA5Q7RTV2 222 aa12.35□□□□□ -0.43
CKS2-201ENST00000314355 AMIGO1Q86WK6 493 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms