RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 GTF2H2Q13888 395 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 OGFRL1Q5TC84 451 aaPredicted RBP12.21□□□□□ -0.46
RNF4-201ENST00000314289 GTF2H2CQ6P1K8 395 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 GDPD4Q6W3E5 623 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 HSD11B1LQ7Z5J1 315 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 TRIM74Q86UV6 250 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 TRIM73Q86UV7 250 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 VRK3Q8IV63 474 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 PYCR2Q96C36 320 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 RSPRY1Q96DX4 576 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 FAM210AQ96ND0 272 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 COPS8Q99627 209 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 Q9H521 79 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 WWOXQ9NZC7 414 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 NDUFA13Q9P0J0 144 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 EGFL7Q9UHF1 273 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 SCN8AQ9UQD0 1980 aa12.21□□□□□ -0.46
RNF4-201ENST00000314289 PLK4O00444 970 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 S100BP04271 92 aaPredicted RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 CA3P07451 260 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 POLR2EP19388 210 aaKnown RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 RPL26P61254 145 aaKnown RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 ABRAXAS2Q15018 415 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 ZNF77Q15935 545 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 RARS2Q5T160 578 aaKnown RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 GPRC6AQ5T6X5 926 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 IFNEQ86WN2 208 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 ZFP28Q8NHY6 868 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 FOXJ1Q92949 421 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 ECHDC3Q96DC8 303 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 SEMA6AQ9H2E6 1030 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 PSMD13Q9UNM6 376 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 ERVW-1Q9UQF0 538 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 OTOL1A6NHN0 477 aaPredicted RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 CASQ2O14958 399 aaPredicted RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 MLYCDO95822 493 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 CHEK2O96017 543 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 UROSP10746 265 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 HLA-EP13747 358 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 GGT5P36269 586 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 CSNK1DP48730 415 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 RGS4P49798 205 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 HPCAP84074 193 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 TXNDC11Q6PKC3 985 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 Q6ZSR9 355 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 ADAMTSL2Q86TH1 951 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 DNAJB14Q8TBM8 379 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 FAM126AQ9BYI3 521 aaPredicted RBP12.2□□□□□ -0.46
RNF4-201ENST00000314289 CROTQ9UKG9 612 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 ANGPTL3Q9Y5C1 460 aa12.2□□□□□ -0.46
RNF4-201ENST00000314289 TRBV5-4A0A0C4DH59 114 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 ACOT8O14734 319 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 ANGPT2O15123 496 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 RAD51BO15315 384 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 SYNCRIPO60506 623 aaKnown RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 PIM1P11309 404 aaPredicted RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 DGKAP23743 735 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 PCSK6P29122 969 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 GALK1P51570 392 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 HMGCS1Q01581 520 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 MAPRE2Q15555 327 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 TIGD2Q4W5G0 525 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 ELMSAN1Q6PJG2 1045 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 CACUL1Q86Y37 369 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 LILRA2Q8N149 483 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 MARVELD2Q8N4S9 558 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 SNRNP27Q8WVK2 155 aaKnown RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 SPAG4Q9NPE6 437 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 GOLGA4Q13439 2230 aaKnown RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 A0A1B0GTW7 788 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 SPINT3P49223 89 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 MYBPC1Q00872 1141 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 GRIN2CQ14957 1233 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 C6orf136Q5SQH8 315 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 MILR1Q7Z6M3 343 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 AMIGO2Q86SJ2 522 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 GPR65Q8IYL9 337 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 SFRP1Q8N474 314 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 TMEM79Q9BSE2 394 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 HTATIP2Q9BUP3 242 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 WRAP53Q9BUR4 548 aaKnown RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 PCDH12Q9NPG4 1184 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 NUDT4Q9NZJ9 180 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 HSPA8P11142 646 aaKnown RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 NELFEP18615 380 aaKnown RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 NSG1P42857 185 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 EPHA5P54756 1037 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 DHCR24Q15392 516 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 NR6A1Q15406 480 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 TMEM259Q4ZIN3 620 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 RABL3Q5HYI8 236 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 PRSS36Q5K4E3 855 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 IL23RQ5VWK5 629 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 ZNF707Q96C28 371 aaPredicted RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 ZFP14Q9HCL3 533 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 SDR39U1Q9NRG7 319 aaPredicted RBP12.19□□□□□ -0.46
RNF4-201ENST00000314289 COQ6Q9Y2Z9 468 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 RNF11Q9Y3C5 154 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 GPR45Q9Y5Y3 372 aa12.19□□□□□ -0.46
RNF4-201ENST00000314289 NUP214P35658 2090 aaPredicted RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms