RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 SLC5A10A0PJK1 596 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 CFAP99D6REC4 459 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 TNFSF15O95150 251 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 PNLIPP16233 465 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 SH3BP2P78314 561 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 ABRQ12979 859 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 PDIA2Q13087 525 aaKnown RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 AGAP9Q5VTM2 703 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 DUPD1Q68J44 220 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 WASH2PQ6VEQ5 465 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 RAB11FIP2Q7L804 512 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 NLRP9Q7RTR0 991 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 CILP2Q8IUL8 1156 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 OR10G6Q8NH81 332 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 HM13Q8TCT9 377 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 TRIM44Q96DX7 344 aaPredicted RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 SNF8Q96H20 258 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 AHCYL2Q96HN2 611 aaKnown RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 FERD3LQ96RJ6 166 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 EBNA1BP2Q99848 306 aaKnown RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 C19orf43Q9BQ61 176 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 ERP44Q9BS26 406 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 CCDC86Q9H6F5 360 aaKnown RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 MRM3Q9HC36 420 aaKnown RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 ASCL3Q9NQ33 180 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 WASH6PQ9NQA3 447 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 SMYD2Q9NRG4 433 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 FOXJ2Q9P0K8 574 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 DMGDHQ9UI17 866 aaKnown RBP11.75□□□□□ -0.53
SCFD1-201ENST00000311943 SLC24A2Q9UI40 661 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 PSAT1Q9Y617 370 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 TEX264Q9Y6I9 313 aa11.75□□□□□ -0.53
SCFD1-201ENST00000311943 CAPN5O15484 640 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 NDUFS3O75489 264 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 UBXN7O94888 489 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 PROS1P07225 676 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 SLC35G4P0C7Q5 338 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 FGF3P11487 239 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 VCLP18206 1134 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 ACADLP28330 430 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 EIF2S3P41091 472 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 MAPK10P53779 464 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 SARNPP82979 210 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 TIAL1Q01085 375 aaKnown RBP eCLIP11.74□□□□□ -0.532e-6■■■□□ 18.2
SCFD1-201ENST00000311943 ITIH4Q14624 930 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 KCNAB1Q14722 419 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 TYSND1Q2T9J0 566 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 RBM20Q5T481 1227 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 IL17FQ96PD4 163 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 WDR70Q9NW82 654 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 LOXL2Q9Y4K0 774 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 MRFAP1Q9Y605 127 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 DNMT3AQ9Y6K1 912 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 ACACAQ13085 2346 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 OR6C74A6NCV1 312 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 BTN3A3O00478 584 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 PRMT5O14744 637 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 TCEA3O75764 348 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 THRAP10827 490 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 AMD1P17707 334 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 SSTR1P30872 391 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 GMPRP36959 345 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 HALP42357 657 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 GPR3P46089 330 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 LSSP48449 732 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 CARSP49589 748 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 LIMK2P53671 638 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 PLTPP55058 493 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 YBX1P67809 324 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 RTP5Q14D33 572 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 PTRHD1Q6GMV3 140 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 C19orf48Q6RUI8 117 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 KCNMB4Q86W47 210 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 PROSER1Q86XN7 944 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 SIDT2Q8NBJ9 832 aaKnown RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 FBXO36Q8NEA4 188 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 OR6C4Q8NGE1 309 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 FBXO25Q8TCJ0 367 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 TFGQ92734 400 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 SGSM3Q96HU1 749 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 ELMO2Q96JJ3 720 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 ZNF514Q96K75 400 aaPredicted RBP11.74□□□□□ -0.53
SCFD1-201ENST00000311943 POT1Q9NUX5 634 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 EVA1BQ9NVM1 165 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 RNF14Q9UBS8 474 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 FAM169AQ9Y6X4 670 aa11.74□□□□□ -0.53
SCFD1-201ENST00000311943 URB1O60287 2271 aaKnown RBP11.73□□□□□ -0.53
SCFD1-201ENST00000311943 ANKRD11Q6UB99 2663 aaPredicted RBP11.73□□□□□ -0.53
SCFD1-201ENST00000311943 IGHV5-51A0A0C4DH38 117 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 TEX51A0A1B0GUA7 166 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 C17orf113A0A1B0GUU1 675 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 SRRM3A6NNA2 597 aaPredicted RBP11.73□□□□□ -0.53
SCFD1-201ENST00000311943 C9orf172C9J069 976 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 KRT37O76014 449 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 USP1O94782 785 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 OR56A5P0C7T3 313 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 POLR2CP19387 275 aaPredicted RBP11.73□□□□□ -0.53
SCFD1-201ENST00000311943 MORF4L2Q15014 288 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 PLCL1Q15111 1095 aa11.73□□□□□ -0.53
SCFD1-201ENST00000311943 HIF1AQ16665 826 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms