RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 CPNE7Q9UBL6 633 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 TRMT6Q9UJA5 497 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 APOBEC2Q9Y235 224 aaKnown RBP17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 DHRS7Q9Y394 339 aa17.52■□□□□ 0.4
SSSCA1-201ENST00000309328 ASCC3Q8N3C0 2202 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 NIPSNAP2O75323 286 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 FAM153BP0C7A2 387 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 MYBL2P10244 700 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 CNTFP26441 200 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 RGS4P49798 205 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 SERPINB9P50453 376 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 NOVA1P51513 510 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 CLCN7P51798 805 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 EPHA4P54764 986 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 SLC12A2P55011 1212 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 UBE2IP63279 158 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 NR1D2Q14995 579 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 SEPT7Q16181 437 aaKnown RBP17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 FAM153CQ494X1 144 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 ZNF549Q6P9A3 640 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 PNPLA1Q8N8W4 532 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 GPATCH11Q8N954 259 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 CAVIN3Q969G5 261 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 MCMBPQ9BTE3 642 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 FAM8A1Q9UBU6 413 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 PSAT1Q9Y617 370 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 CEP250Q9BV73 2442 aa17.51■□□□□ 0.39
SSSCA1-201ENST00000309328 IQCF5A8MTL0 148 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 RFPL3O75679 317 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 INHBAP08476 426 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 MTHFD1P11586 935 aaKnown RBP17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 BRAFP15056 766 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 ACADVLP49748 655 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 LIMK2P53671 638 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 GBX1Q14549 363 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 RPE65Q16518 533 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 LGSNQ5TDP6 509 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 HECTD2Q5U5R9 776 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 UNC5DQ6UXZ4 953 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 KRT222Q8N1A0 295 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 MAGEC3Q8TD91 643 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 AENQ8WTP8 325 aaKnown RBP17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 C12orf66Q96MD2 445 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 CAMK1GQ96NX5 476 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 GPR22Q99680 433 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 WWP1Q9H0M0 922 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 SMYD2Q9NRG4 433 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 LRIT1Q9P2V4 623 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 POLG2Q9UHN1 485 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 ZNF180Q9UJW8 692 aa17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 V9GYY5 206 aaPredicted RBP17.5■□□□□ 0.39
SSSCA1-201ENST00000309328 LY6G6EA0A0G2JKS1 128 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 EXOC1LA0A1B0GW35 172 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 FAM95CA0A1B0GW59 222 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 LILRA5A6NI73 299 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CXorf49A8MYA2 514 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 ERLIN1O75477 346 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 KCNK5O95279 499 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 ITGB6P18564 788 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 FDXRP22570 491 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CCNFP41002 786 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 PREPP48147 710 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 GPLD1P80108 840 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 PDAP1Q13442 181 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 KRT33BQ14525 404 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CLCA4Q14CN2 919 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 TTC23LQ6PF05 361 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 KLHL35Q6PF15 583 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 EFL1Q7Z2Z2 1120 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 GSPT2Q8IYD1 628 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 TBC1D21Q8IYX1 336 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 PHC3Q8NDX5 983 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 IFI44Q8TCB0 444 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 LKAAEAR1Q8TD35 194 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CD200R1Q8TD46 325 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 NAT14Q8WUY8 206 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 SLC44A1Q8WWI5 657 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 TFGQ92734 400 aaPredicted RBP17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 RMDN2Q96LZ7 410 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 SLC38A3Q99624 504 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 GPR21Q99679 349 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 DPYSL5Q9BPU6 564 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 TRIT1Q9H3H1 467 aaKnown RBP17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CAAP1Q9H8G2 361 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 SYTL2Q9HCH5 934 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 SLC40A1Q9NP59 571 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 PSMD13Q9UNM6 376 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CDYLQ9Y232 598 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 WDR37Q9Y2I8 494 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 U3KQA8 63 aa17.49■□□□□ 0.39
SSSCA1-201ENST00000309328 CPED1A4D0V7 1026 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 KRT38O76015 456 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 EML2O95834 649 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 MPC1LP0DKB6 136 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 ACADLP28330 430 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 SLC19A1P41440 591 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 MSH2P43246 934 aa17.48■□□□□ 0.39
SSSCA1-201ENST00000309328 MAZP56270 477 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms