RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 KRT8P05787 483 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 TCEA1P23193 301 aaKnown RBP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 OR1E1P30953 314 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 MLLT6P55198 1093 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 FOXD4Q12950 439 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 CDK5R2Q13319 367 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 PCBP1Q15365 356 aaKnown RBP eCLIP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 DUSP28Q4G0W2 176 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 PRAMEF19Q5SWL8 479 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 Q8N9G6 341 aaPredicted RBP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 ATG16L2Q8NAA4 619 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 RPL3LQ92901 407 aaKnown RBP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 ULK4Q96C45 1275 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 BRINP2Q9C0B6 783 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 CARS2Q9HA77 564 aaKnown RBP10.98□□□□□ -0.65
PTPN7-201ENST00000309017 BPIFA1Q9NP55 256 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 SLC52A3Q9NQ40 469 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 ITM2CQ9NQX7 267 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 TMLHEQ9NVH6 421 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 SMPD4Q9NXE4 827 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 IKZF3Q9UKT9 509 aa10.98□□□□□ -0.65
PTPN7-201ENST00000309017 PRMT5O14744 637 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RAD51BO15315 384 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 NPPAP01160 153 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RPS17P08708 135 aaKnown RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 CD36P16671 472 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ITGB6P18564 788 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 HLA-DPA1P20036 260 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 S100A5P33763 92 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 DCTP40126 519 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 PGFP49763 221 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 KCNC4Q03721 635 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 PHKG1Q16816 387 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ZNF362Q5T0B9 420 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 OVOS1Q6IE37 1185 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 AHSA2Q719I0 299 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 HEATR4Q86WZ0 1026 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 LGI2Q8N0V4 545 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 CLIP4Q8N3C7 705 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 SVOPQ8N4V2 548 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 FAR1Q8WVX9 515 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 B3GALT6Q96L58 329 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 INTS6Q9UL03 887 aaKnown RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ERVK-11Q9UQG0 969 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 LOC100506127A0A0U1RQW1 187 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 FAM92AA1XBS5 289 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RGS10O43665 173 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 SEC22BO75396 215 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 FKBP9O95302 570 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 MT-ND2P03891 347 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 OR4Q2P0C623 313 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 OGNP20774 298 aaKnown RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 MFSD10Q14728 455 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 SF3B4Q15427 424 aaKnown RBP eCLIP10.97□□□□□ -0.652e-6■■□□□ 12.6
PTPN7-201ENST00000309017 DEPDC1Q5TB30 811 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 THOC7Q6I9Y2 204 aaKnown RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 DLEU7Q6UYE1 221 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 FKBP9P1Q75LS8 142 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 LIMS2Q7Z4I7 341 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 HORMAD1Q86X24 394 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 P3H2Q8IVL5 708 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 KLHDC8BQ8IXV7 354 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 PIK3C3Q8NEB9 887 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 BRSK1Q8TDC3 778 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 EEF1AKMT1Q8WVE0 214 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ZNF583Q96ND8 569 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 SH3GL1Q99961 368 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RMND5AQ9H871 391 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 PAK1IP1Q9NWT1 392 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ANKMY1Q9P2S6 941 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 EFCAB9A8MZ26 197 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 GPR182O15218 404 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 DIRAS1O95057 198 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 TGFBR1P36897 503 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 NR4A2P43354 598 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ERVPABLB-1P60509 514 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 NKG7Q16617 165 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RFX4Q33E94 735 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 GTDC1Q4AE62 458 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RFTN2Q52LD8 501 aaPredicted RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 PIK3R6Q5UE93 754 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 LETMD1Q6P1Q0 360 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 MSANTD2Q6P1R3 559 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 Q6ZSR9 355 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 BEND5Q7L4P6 421 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 HIPK1Q86Z02 1210 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 OR6Q1Q8NGQ2 317 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 UPF1Q92900 1129 aaKnown RBP eCLIP10.97□□□□□ -0.656e-7■■■□□ 18.2
PTPN7-201ENST00000309017 OR52E6Q96RD3 313 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 APOL4Q9BPW4 351 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 SMOC2Q9H3U7 446 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 KAT8Q9H7Z6 458 aaKnown RBP10.97□□□□□ -0.65
PTPN7-201ENST00000309017 NMUR1Q9HB89 426 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 ASB1Q9Y576 335 aa10.97□□□□□ -0.65
PTPN7-201ENST00000309017 RECQL5O94762 991 aaPredicted RBP10.96□□□□□ -0.65
PTPN7-201ENST00000309017 GABARAPO95166 117 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 CCDC159P0C7I6 412 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 HTR7P34969 479 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 ISL1P61371 349 aa10.96□□□□□ -0.65
PTPN7-201ENST00000309017 PPP2R2BQ00005 443 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms