RNA–Protein interactions for RNA: ENST00000308873.10

RUNX3-201, Transcript of runt related transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RUNX3, Length 3,861 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-201ENST00000308873 PCDHB9Q9Y5E1 797 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 TRIP12Q14669 1992 aaPredicted RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 SIP14410 1827 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 F5H5T6 163 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 TMBIM6P55061 237 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 MADCAM1Q13477 382 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 ZNF846Q147U1 533 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 CTU2Q2VPK5 515 aaKnown RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 C8orf82Q6P1X6 216 aaPredicted RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 NKAPQ8N5F7 415 aaKnown RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 ARL10Q8N8L6 244 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 NEURL2Q9BR09 285 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 ZBED2Q9BTP6 218 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 MYADML2A6NDP7 307 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 NT5C1B-RDH14C9J2C7 533 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 CPSF4O95639 269 aaKnown RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 PBX3P40426 434 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 NEK2P51955 445 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 EMX2Q04743 252 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 ZNF33AQ06730 810 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 TAF12Q16514 161 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 MBOAT1Q6ZNC8 495 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 EFL1Q7Z2Z2 1120 aaKnown RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 MON1AQ86VX9 555 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 TRUB1Q8WWH5 349 aaKnown RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 PPP1R14BQ96C90 147 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 DUS3LQ96G46 650 aaKnown RBP14.59□□□□□ -0.07
RUNX3-201ENST00000308873 NSMCE3Q96MG7 304 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 AMBRA1Q9C0C7 1298 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 KATNBL1Q9H079 304 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 IKZF5Q9H5V7 419 aa14.59□□□□□ -0.07
RUNX3-201ENST00000308873 TBX1O43435 398 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 NDST3O95803 873 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 OXCT1P55809 520 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 RAPSNQ13702 412 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 SKIV2LQ15477 1246 aaKnown RBP14.58□□□□□ -0.07
RUNX3-201ENST00000308873 DHRS4L2Q6PKH6 230 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 SLC22A16Q86VW1 577 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 CHDHQ8NE62 594 aaPredicted RBP14.58□□□□□ -0.07
RUNX3-201ENST00000308873 CAPSLQ8WWF8 208 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 DPF3Q92784 378 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 UBE2FQ969M7 185 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 SH3YL1Q96HL8 342 aaPredicted RBP14.58□□□□□ -0.07
RUNX3-201ENST00000308873 SCN3BQ9NY72 215 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 NEU3Q9UQ49 428 aa14.58□□□□□ -0.07
RUNX3-201ENST00000308873 LCHNA4D1U4 455 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 MROH6A6NGR9 719 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 CNOT3O75175 753 aaKnown RBP14.58□□□□□ -0.08
RUNX3-201ENST00000308873 RECQL5O94762 991 aaPredicted RBP14.58□□□□□ -0.08
RUNX3-201ENST00000308873 PFKLP17858 780 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 HK3P52790 923 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 NPTX1Q15818 432 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 CTXN3Q4LDR2 81 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 NIPAL1Q6NVV3 410 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 HORMAD1Q86X24 394 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 ADHFE1Q8IWW8 467 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 POC5Q8NA72 575 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 STON2Q8WXE9 905 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 BRI3BPQ8WY22 251 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 ASPSCR1Q9BZE9 553 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 GMPPBQ9Y5P6 360 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 TRPV2Q9Y5S1 764 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 ZNF646O15015 1829 aaPredicted RBP14.58□□□□□ -0.08
RUNX3-201ENST00000308873 MBLAC1A4D2B0 266 aaPredicted RBP14.58□□□□□ -0.08
RUNX3-201ENST00000308873 IGFBP5P24593 272 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 HTR1EP28566 365 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 GTF2H2Q13888 395 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 NKG7Q16617 165 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 GTF2H2CQ6P1K8 395 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 TMEM53Q6P2H8 277 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 DENND1CQ8IV53 801 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 RERGLQ9H628 205 aa14.58□□□□□ -0.08
RUNX3-201ENST00000308873 UBA2Q9UBT2 640 aaPredicted RBP14.58□□□□□ -0.08
RUNX3-201ENST00000308873 PABPN1LA6NDY0 278 aaKnown RBP14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ZNF99A8MXY4 864 aaPredicted RBP14.57□□□□□ -0.08
RUNX3-201ENST00000308873 SLC1A7O00341 560 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ULK1O75385 1050 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 MYO1DO94832 1006 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 PAPSS2O95340 614 aaPredicted RBP14.57□□□□□ -0.08
RUNX3-201ENST00000308873 NTRK1P04629 796 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 SERPINB10P48595 397 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 DGKEP52429 567 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 CACHD1Q5VU97 1274 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 AFTPHQ6ULP2 937 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ZFAND4Q86XD8 727 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 CIPCQ9C0C6 399 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 CSNK1G1Q9HCP0 422 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 FLRT1Q9NZU1 646 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 DNAJB9Q9UBS3 223 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ZNF490Q9ULM2 529 aaPredicted RBP14.57□□□□□ -0.08
RUNX3-201ENST00000308873 PCDHGA4Q9Y5G9 962 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 CPQQ9Y646 472 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ZNF701M0R085 212 aaPredicted RBP14.57□□□□□ -0.08
RUNX3-201ENST00000308873 DGUOKQ16854 277 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 XKR4Q5GH76 650 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 XAF1Q6GPH4 301 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ZNF280BQ86YH2 543 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 CCDC103Q8IW40 242 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 DERL2Q9GZP9 239 aa14.57□□□□□ -0.08
RUNX3-201ENST00000308873 ARNT2Q9HBZ2 717 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms