RNA–Protein interactions for RNA: ENST00000308639.13

RELA-201, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RELA, Length 2,681 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-201ENST00000308639 ZNF711Q9Y462 761 aa20.5■□□□□ 0.87
RELA-201ENST00000308639 PCDHB3Q9Y5E6 796 aa20.5■□□□□ 0.87
RELA-201ENST00000308639 SLC30A1Q9Y6M5 507 aa20.5■□□□□ 0.87
RELA-201ENST00000308639 UMPSP11172 480 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 CDH1P12830 882 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 MATN1P21941 496 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 HMOX2P30519 316 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 OR1D2P34982 312 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 MTHFRP42898 656 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PTGER3P43115 390 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 KPNA1P52294 538 aaPredicted RBP20.49■□□□□ 0.87
RELA-201ENST00000308639 NKX3-2P78367 333 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 FAM174BQ3ZCQ3 159 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PTRHD1Q6GMV3 140 aaKnown RBP20.49■□□□□ 0.87
RELA-201ENST00000308639 NCEH1Q6PIU2 408 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 MILR1Q7Z6M3 343 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PHACTR4Q8IZ21 702 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 MUC13Q9H3R2 512 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 SLC6A13Q9NSD5 602 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 NUDT4Q9NZJ9 180 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 LHX3Q9UBR4 397 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 ZNF639Q9UID6 485 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 DHRS7Q9Y394 339 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PIKFYVEQ9Y2I7 2098 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 ESR1P03372 595 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 MRPL19P49406 292 aaKnown RBP20.49■□□□□ 0.87
RELA-201ENST00000308639 SERPINA9Q86WD7 417 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PROSER1Q86XN7 944 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 DPP10Q8N608 796 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PCSK9Q8NBP7 692 aaKnown RBP20.49■□□□□ 0.87
RELA-201ENST00000308639 FBXO22Q8NEZ5 403 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 EGFL8Q99944 293 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 THUMPD3Q9BV44 507 aaKnown RBP20.49■□□□□ 0.87
RELA-201ENST00000308639 OSBPL6Q9BZF3 934 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 HIPK3Q9H422 1215 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 RNF186Q9NXI6 227 aa20.49■□□□□ 0.87
RELA-201ENST00000308639 PAIP2BQ9ULR5 123 aaKnown RBP20.49■□□□□ 0.87
RELA-201ENST00000308639 A0A1B0GVM2 712 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 TYW5A2RUC4 315 aaKnown RBP20.48■□□□□ 0.87
RELA-201ENST00000308639 SEC24AO95486 1093 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 HECTD3Q5T447 861 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 C10orf111Q8N326 155 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 RMI1Q9H9A7 625 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 EXD2Q9NVH0 621 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 PKD2L2Q9NZM6 624 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 KLQ9UEF7 1012 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 ZNHIT2Q9UHR6 403 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 VPS9D1Q9Y2B5 631 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 PKP3Q9Y446 797 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 PCDHB7Q9Y5E2 793 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 KANSL1LA0AUZ9 987 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 PRMT5O14744 637 aaPredicted RBP20.48■□□□□ 0.87
RELA-201ENST00000308639 NBNO60934 754 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 PRAMEF1O95521 474 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 ANXA6P08133 673 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 PSMA3P25788 255 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 CLCN4P51793 760 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 RHOAP61586 193 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 BNIP3Q12983 259 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 FXNQ16595 210 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 SPANXN4Q5MJ08 99 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 AURKBQ96GD4 344 aaPredicted RBP20.48■□□□□ 0.87
RELA-201ENST00000308639 FANCEQ9HB96 536 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 NIPSNAP3AQ9UFN0 247 aaPredicted RBP20.48■□□□□ 0.87
RELA-201ENST00000308639 MAGEL2Q9UJ55 1249 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 WDR37Q9Y2I8 494 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 SH3GLB1Q9Y371 365 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 CCL27Q9Y4X3 112 aa20.48■□□□□ 0.87
RELA-201ENST00000308639 NUP214P35658 2090 aaPredicted RBP20.47■□□□□ 0.87
RELA-201ENST00000308639 GALTP07902 379 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 GGT1P19440 569 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 KIAA0040Q15053 153 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 TTPALQ9BTX7 342 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 ADNPQ9H2P0 1102 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 SLC25A37Q9NYZ2 338 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 LIMD1Q9UGP4 676 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 GAPDHSO14556 408 aaPredicted RBP20.47■□□□□ 0.87
RELA-201ENST00000308639 TBL1XO60907 577 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 ALPLP05186 524 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 PRKACGP22612 351 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 NUP107P57740 925 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 ILF2Q12905 390 aaKnown RBP20.47■□□□□ 0.87
RELA-201ENST00000308639 PLD1Q13393 1074 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 PWP1Q13610 501 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 GPNMBQ14956 572 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 PCBP2Q15366 365 aaKnown RBP eCLIP20.47■□□□□ 0.872e-7■■■■□ 26.6
RELA-201ENST00000308639 IMPG1Q17R60 797 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 SPATS1Q496A3 300 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 MSRB3Q8IXL7 192 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 PAF1Q8N7H5 531 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 GLT1D1Q96MS3 346 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 TTLL2Q9BWV7 592 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 TOR3AQ9H497 397 aa20.47■□□□□ 0.87
RELA-201ENST00000308639 PFDN6O15212 129 aa20.46■□□□□ 0.87
RELA-201ENST00000308639 SLC25A14O95258 325 aaPredicted RBP20.46■□□□□ 0.87
RELA-201ENST00000308639 ZNF182P17025 639 aaPredicted RBP20.46■□□□□ 0.87
RELA-201ENST00000308639 NR4A1P22736 598 aa20.46■□□□□ 0.87
RELA-201ENST00000308639 PIGAP37287 484 aa20.46■□□□□ 0.87
RELA-201ENST00000308639 DAG1Q14118 895 aa20.46■□□□□ 0.87
RELA-201ENST00000308639 CCNYL2Q5T2Q4 361 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms