RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 NPC1O15118 1278 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 TAPBPO15533 448 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 MTX2O75431 263 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 WFS1O76024 890 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 ATP6V1G2O95670 118 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 ENO2P09104 434 aaPredicted RBP11.66□□□□□ -0.54
TRIM40-205ENST00000307859 COX4I1P13073 169 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 C6P13671 934 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 PSMD8P48556 350 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 PKNOX1P55347 436 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 CDKL1Q00532 357 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 DPTQ07507 201 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 SP140Q13342 867 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 CAMK2GQ13555 558 aaPredicted RBP11.66□□□□□ -0.54
TRIM40-205ENST00000307859 HTR4Q13639 388 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 E2F5Q15329 346 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 FAM46CQ5VWP2 391 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 FAM219BQ5XKK7 198 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 SULT1C3Q6IMI6 304 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 EFL1Q7Z2Z2 1120 aaKnown RBP11.66□□□□□ -0.54
TRIM40-205ENST00000307859 SYVN1Q86TM6 617 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 NLRP8Q86W28 1048 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 RASGRP3Q8IV61 690 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 MMAAQ8IVH4 418 aaKnown RBP11.66□□□□□ -0.54
TRIM40-205ENST00000307859 POU5F2Q8N7G0 328 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 ESAMQ96AP7 390 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 RHBDF1Q96CC6 855 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 NUS1Q96E22 293 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 NECTIN4Q96NY8 510 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 ZNF225Q9UK10 706 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 CNOT6Q9ULM6 557 aaKnown RBP11.66□□□□□ -0.54
TRIM40-205ENST00000307859 ST14Q9Y5Y6 855 aa11.66□□□□□ -0.54
TRIM40-205ENST00000307859 COPG1Q9Y678 874 aaKnown RBP11.66□□□□□ -0.54
TRIM40-205ENST00000307859 PIP5K1BO14986 540 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 GPC4O75487 556 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 RECQL5O94762 991 aaPredicted RBP11.65□□□□□ -0.54
TRIM40-205ENST00000307859 C8GP07360 202 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 THRAP10827 490 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 HNRNPH1P31943 449 aaKnown RBP11.65□□□□□ -0.54
TRIM40-205ENST00000307859 P2RY2P41231 377 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 TNFRSF4P43489 277 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 PRLHRP49683 370 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 SQLEQ14534 574 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 RBBP7Q16576 425 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 PIP5KL1Q5T9C9 394 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 GPRIN3Q6ZVF9 776 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 DGLUCYQ7Z3D6 616 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 GOLGA7Q7Z5G4 137 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 PHYKPLQ8IUZ5 450 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 ARHGAP24Q8N264 748 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 CHCHD4Q8N4Q1 142 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 RASGEF1AQ8N9B8 481 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 SMRP1Q8NCR6 262 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 RP9Q8TA86 221 aaKnown RBP11.65□□□□□ -0.54
TRIM40-205ENST00000307859 MCUR1Q96AQ8 359 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 C3orf30Q96M34 536 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 LENG8Q96PV6 779 aaPredicted RBP11.65□□□□□ -0.54
TRIM40-205ENST00000307859 KCNA7Q96RP8 456 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 TMEM79Q9BSE2 394 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 RTKNQ9BST9 563 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 RSPH9Q9H1X1 276 aaPredicted RBP11.65□□□□□ -0.54
TRIM40-205ENST00000307859 TUBB1Q9H4B7 451 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 FBRSL1Q9HCM7 1045 aaKnown RBP11.65□□□□□ -0.54
TRIM40-205ENST00000307859 ZDHHC4Q9NPG8 344 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 COQ6Q9Y2Z9 468 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 FADS3Q9Y5Q0 445 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 GVINP1Q7Z2Y8 2422 aa11.65□□□□□ -0.54
TRIM40-205ENST00000307859 MEI4A8MW99 385 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 GFYI3L273 518 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 OR7A17O14581 309 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 SLC16A5O15375 505 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 SLCO2B1O94956 709 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 UROSP10746 265 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 PRDX3P30048 256 aaKnown RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 DRD3P35462 400 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 KIR2DL1P43626 348 aaPredicted RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 SOX9P48436 509 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 ATP4BP51164 291 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 GALK1P51570 392 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 RAP1GDS1P52306 607 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 HSPA14Q0VDF9 509 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 CNTN1Q12860 1018 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 GTF2H2Q13888 395 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 BOP1Q14137 746 aaKnown RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 PTK2BQ14289 1009 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 SNCBQ16143 134 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 C18orf21Q32NC0 220 aaPredicted RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 WASHC2DQ5SRD0 308 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 ZNF648Q5T619 568 aaPredicted RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 GTF2H2CQ6P1K8 395 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 TTC23LQ6PF05 361 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 VRK3Q8IV63 474 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 ASB11Q8WXH4 323 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 ELMO1Q92556 727 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 EZH1Q92800 747 aaPredicted RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 MARK4Q96L34 752 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 SLC12A9Q9BXP2 914 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 CD244Q9BZW8 370 aa11.64□□□□□ -0.55
TRIM40-205ENST00000307859 G3BP2Q9UN86 482 aaKnown RBP11.64□□□□□ -0.55
TRIM40-205ENST00000307859 MYO10Q9HD67 2058 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms