RNA–Protein interactions for RNA: ENST00000306085.10

TRIM56-201, Transcript of tripartite motif containing 56, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRIM56, Length 10,952 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-201ENST00000306085 RDH11Q8TC12 318 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CORO1BQ9BR76 489 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 SETD4Q9NVD3 440 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 FBXW2Q9UKT8 454 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 PDE10AQ9Y233 779 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 A8MV72 311 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GABBR2O75899 941 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CCKBRP32239 447 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 BTBD16Q32M84 506 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 KLHL22Q53GT1 634 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ZC3H12AQ5D1E8 599 aaKnown RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 FAM13CQ8NE31 585 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ZDHHC15Q96MV8 337 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 HOPXQ9BPY8 73 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CHD4Q14839 1912 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ITGA2BP08514 1039 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GLYATQ6IB77 296 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 KIAA1161Q6NSJ0 714 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ESX1Q8N693 406 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 MUC13Q9H3R2 512 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 NANSQ9NR45 359 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ABCC13Q9NSE7 274 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 A0A0G2JMP0 313 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 CDH8P55286 799 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 PCSK9Q8NBP7 692 aaKnown RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 OR4M2Q8NGB6 313 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 RAB2BQ8WUD1 216 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TMEM203Q969S6 136 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 C19orf12Q9NSK7 152 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 LCHNA4D1U4 455 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ELOA3DA6NLF2 546 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 SLC9A3R1O14745 358 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 PRAMEF12O95522 483 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 IFNA10P01566 189 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 EDNRAP25101 427 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 C2orf80Q0P641 193 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 TARDBPQ13148 414 aaKnown RBP eCLIP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 UGT8Q16880 541 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ELOA3BQ3SY89 546 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 RAVER1Q8IY67 606 aaKnown RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 RBFAQ8N0V3 343 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ELOA3Q8NG57 546 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 GIMAP5Q96F15 307 aa13.23□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF70Q9UC06 446 aaPredicted RBP13.23□□□□□ -0.29
TRIM56-201ENST00000306085 C1orf196B1AJZ1 125 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ALLCQ8N6M5 410 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 KCTD7Q96MP8 289 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ABI3Q9P2A4 366 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 WDR62O43379 1518 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF268Q14587 947 aaPredicted RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 CDC42EP5Q6NZY7 148 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 DPF1Q92782 380 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SLC38A4Q969I6 547 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 MTMR8Q96EF0 704 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SEMA3CQ99985 751 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 TEX13CA0A0J9YWL9 993 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 RHPN2P1A8MT19 583 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 PCCBP05166 539 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ATP5C1P36542 298 aaKnown RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SLC26A5P58743 744 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 OR4L1Q8NH43 312 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SLC25A36Q96CQ1 311 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 DNAJC18Q9H819 358 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 BORCS7-ASMTA0A0B4J1R7 106 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 DPPA5A6NC42 116 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SNX3O60493 162 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 AMHP03971 560 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 LPOP22079 712 aaPredicted RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 LAS2Q8IYD9 372 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 FBXO15Q8NCQ5 510 aaPredicted RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 BORCS7Q96B45 105 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 WACQ9BTA9 647 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ITSN1Q15811 1721 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 PZPP20742 1482 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ZNF726A6NNF4 738 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A9O60656 530 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 PEPDP12955 493 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 EPCAMP16422 314 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A6P19224 532 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A1P22309 533 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A4P22310 534 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A3P35503 534 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 GRIK4Q16099 956 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 SPATA19Q7Z5L4 167 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 CUZD1Q86UP6 607 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 ARHGAP12Q8IWW6 846 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 CENPSQ8N2Z9 138 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 CXorf21Q9HAI6 301 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A7Q9HAW7 530 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A10Q9HAW8 530 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UGT1A8Q9HAW9 530 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 TGM6O95932 706 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 TACSTD2P09758 323 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 KDELR1P24390 212 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 CYP2U1Q7Z449 544 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 UNC5BQ8IZJ1 945 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 COX18Q8N8Q8 333 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 PNPOQ9NVS9 261 aa13.22□□□□□ -0.29
TRIM56-201ENST00000306085 AFDNP55196 1824 aaKnown RBP13.22□□□□□ -0.29
TRIM56-201ENST00000306085 A0A0G2JLW4 131 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms