RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 IKBKGQ9Y6K9 419 aa23.95■■□□□ 1.43
HOXC9-201ENST00000303450 LY6G6EA0A0G2JKS1 128 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 OR52A4PA6NMU1 304 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 TNFSF14O43557 240 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 FAM155BO75949 473 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 SAT1P21673 171 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 SKIV2L2P42285 1042 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CDKN2DP55273 166 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 TRIP6Q15654 476 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 TTLL9Q3SXZ7 439 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 TRIM48Q8IWZ4 208 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 AVL9Q8NBF6 648 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CAVIN3Q969G5 261 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CXorf40BQ96DE9 158 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 RMDN2Q96LZ7 410 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 C12orf66Q96MD2 445 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 RTKNQ9BST9 563 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 EPB41L4BQ9H329 900 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 STN1Q9H668 368 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 KLHL42Q9P2K6 505 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 TRMT6Q9UJA5 497 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 DHRS7Q9Y394 339 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 U3KQA8 63 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CFAP54Q96N23 3096 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 EXOC1LA0A1B0GW35 172 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CPED1A4D0V7 1026 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 POC1B-GALNT4F8VUJ3 575 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 SLCO2B1O94956 709 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 XRCC1P18887 633 aaPredicted RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 LIMK2P53671 638 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 DNAJC3Q13217 504 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 RPE65Q16518 533 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 MAP9Q49MG5 647 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CAPRIN2Q6IMN6 1127 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 PDZD3Q86UT5 571 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 SLC22A15Q8IZD6 547 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 OR6C4Q8NGE1 309 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 INPP5DQ92835 1189 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 INSM2Q96T92 566 aaPredicted RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 IMP3Q9NV31 184 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 ZNF624Q9P2J8 865 aaPredicted RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CPNE7Q9UBL6 633 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CDYLQ9Y232 598 aa23.94■■□□□ 1.42
HOXC9-201ENST00000303450 MTO1Q9Y2Z2 717 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 CFAP20Q9Y6A4 193 aaKnown RBP23.94■■□□□ 1.42
HOXC9-201ENST00000303450 VIPP01282 170 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 INHBAP08476 426 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 CD9P21926 228 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 SLC19A1P41440 591 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 MSH2P43246 934 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 HHEXQ03014 270 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 PDAP1Q13442 181 aaKnown RBP23.93■■□□□ 1.42
HOXC9-201ENST00000303450 VRK3Q8IV63 474 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 GIMAP7Q8NHV1 300 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 CD200R1Q8TD46 325 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 SKA2Q8WVK7 121 aaPredicted RBP23.93■■□□□ 1.42
HOXC9-201ENST00000303450 NAT6Q93015 286 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 SLC30A3Q99726 388 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 LRIT1Q9P2V4 623 aa23.93■■□□□ 1.42
HOXC9-201ENST00000303450 EME2A4GXA9 379 aaPredicted RBP23.92■■□□□ 1.42
HOXC9-201ENST00000303450 RHPN2P1A8MT19 583 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 NUDT21O43809 227 aaKnown RBP23.92■■□□□ 1.42
HOXC9-201ENST00000303450 MTHFD1P11586 935 aaKnown RBP23.92■■□□□ 1.42
HOXC9-201ENST00000303450 GLB1P16278 677 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 FDXRP22570 491 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 FASLGP48023 281 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 SLC12A2P55011 1212 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 TIAL1Q01085 375 aaKnown RBP eCLIP23.92■■□□□ 1.42
HOXC9-201ENST00000303450 GUSBP11Q6P575 273 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 PIM3Q86V86 326 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 ACVR1CQ8NER5 493 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 SLC44A1Q8WWI5 657 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 PAFAH2Q99487 392 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 GPR22Q99680 433 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 OLFM1Q99784 485 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 CCDC77Q9BR77 488 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 SLC39A10Q9ULF5 831 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 HEBP2Q9Y5Z4 205 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 RNF215Q9Y6U7 377 aa23.92■■□□□ 1.42
HOXC9-201ENST00000303450 ITGA2BP08514 1039 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 CEACAM1P13688 526 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 ACP1P24666 158 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 HSD17B3P37058 310 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 NOVA1P51513 510 aaKnown RBP23.91■■□□□ 1.42
HOXC9-201ENST00000303450 UBE2IP63279 158 aaKnown RBP23.91■■□□□ 1.42
HOXC9-201ENST00000303450 POU4F1Q01851 419 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 KRT33BQ14525 404 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 EFL1Q7Z2Z2 1120 aaKnown RBP23.91■■□□□ 1.42
HOXC9-201ENST00000303450 TFGQ92734 400 aaPredicted RBP23.91■■□□□ 1.42
HOXC9-201ENST00000303450 POT1Q9NUX5 634 aa23.91■■□□□ 1.42
HOXC9-201ENST00000303450 ATP5DP30049 168 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 TAS2R39P59534 338 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 ABRQ12979 859 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 GBX1Q14549 363 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 USP10Q14694 798 aaKnown RBP23.9■■□□□ 1.42
HOXC9-201ENST00000303450 ACSBG2Q5FVE4 666 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 GLRX5Q86SX6 157 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 IFI44Q8TCB0 444 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 SH3KBP1Q96B97 665 aa23.9■■□□□ 1.42
HOXC9-201ENST00000303450 TSR3Q9UJK0 312 aaKnown RBP23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms