RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 FAM110BQ8TC76 370 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SLC25A36Q96CQ1 311 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 RIOK2Q9BVS4 552 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 BRD7Q9NPI1 651 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 GIN1Q9NXP7 522 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF226Q9NYT6 803 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 GLS2Q9UI32 602 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 HIF3AQ9Y2N7 669 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CAPN8A6NHC0 703 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 B8ZZF3 427 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 M0R129 80 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 HSPA12AO43301 675 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 PRAMEF1O95521 474 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 IFNA2P01563 188 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 MPSTP25325 297 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 DRG2P55039 364 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 OC90Q02509 493 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 AIMP2Q13155 320 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF792Q3KQV3 632 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ZNF709Q8N972 641 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 LINC00116Q8NCU8 138 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SNIP1Q8TAD8 396 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TRPM4Q8TD43 1214 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CD300LFQ8TDQ1 290 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 LCN9Q8WX39 176 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FEM1AQ9BSK4 669 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TMEM121BQ9BXQ6 578 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 WDR55Q9H6Y2 383 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 MKKSQ9NPJ1 570 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CENPMQ9NSP4 180 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 DEC1Q9P2X7 70 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 RAB21Q9UL25 225 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 REXO2Q9Y3B8 237 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TMEM131LA2VDJ0 1609 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CLUHO75153 1309 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 NRCAMQ92823 1304 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FXYD6-FXYD2A0A087WZ82 144 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 RPP40O75818 363 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 NTSR2O95665 410 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CXCL14O95715 111 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 PKMP14618 531 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SLC10A7Q0GE19 358 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 VMACQ2NL98 169 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 EIPR1Q53HC9 387 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 PAQR7Q86WK9 346 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ANKRD52Q8NB46 1076 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 C16orf58Q96GQ5 468 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TBX5Q99593 518 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SLC38A3Q99624 504 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FXYD6Q9H0Q3 95 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ALG2Q9H553 416 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 S100A14Q9HCY8 104 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ERVK-5Q9HDB9 667 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 MTMR10Q9NXD2 777 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ERVK-18Q9QC07 812 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 RPL26L1Q9UNX3 145 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FAM205AQ6ZU69 1335 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TECPR2O15040 1411 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TLL1O43897 1013 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CAPN15O75808 1086 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 GLUD1P00367 558 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CTSOP43234 321 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 RORCP51449 518 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 PLGLB1Q02325 96 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TEAD4Q15561 434 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 IL23RQ5VWK5 629 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TWIST2Q8WVJ9 160 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 BORCS8Q96FH0 119 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 C8orf48Q96LL4 319 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 KLHL15Q96M94 604 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 IL12RB2Q99665 862 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SERINC1Q9NRX5 453 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CFAP97Q9P2B7 532 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 C14orf166Q9Y224 244 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 H0YGN5 161 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ARPC2O15144 300 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TACSTD2P09758 323 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 GADD45AP24522 165 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CCNCP24863 283 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ATP5A1P25705 553 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 UQCRC1P31930 480 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 TUBA4AP68366 448 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 MRPS6P82932 125 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 PRKD1Q15139 912 aaPredicted RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 HECTD2Q5U5R9 776 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 YTHDF3Q7Z739 585 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 SLC22A8Q8TCC7 542 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FTHL17Q9BXU8 183 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 CDT1Q9H211 546 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 EHD4Q9H223 541 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FARSBQ9NSD9 589 aaKnown RBP10.25□□□□□ -0.77
CLIP1-201ENST00000302528 NUDT15Q9NV35 164 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 EMC3Q9P0I2 261 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 ARL5AQ9Y689 179 aa10.25□□□□□ -0.77
CLIP1-201ENST00000302528 FRMPD4Q14CM0 1322 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 TEX13DA0A0J9YY54 714 aaPredicted RBP10.24□□□□□ -0.77
CLIP1-201ENST00000302528 hCG_2039718K7EN88 272 aa10.24□□□□□ -0.77
CLIP1-201ENST00000302528 CXCL11O14625 94 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms