RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 RSPH9Q9H1X1 276 aaPredicted RBP11.78□□□□□ -0.52
TPM3-202ENST00000302206 FBRSQ9HAH7 460 aa11.78□□□□□ -0.52
TPM3-202ENST00000302206 SEMA4BQ9NPR2 832 aaPredicted RBP11.78□□□□□ -0.52
TPM3-202ENST00000302206 TRPV5Q9NQA5 729 aa11.78□□□□□ -0.52
TPM3-202ENST00000302206 EIF2B4Q9UI10 523 aaKnown RBP11.78□□□□□ -0.52
TPM3-202ENST00000302206 ADAMTS6Q9UKP5 1117 aa11.78□□□□□ -0.52
TPM3-202ENST00000302206 COPG1Q9Y678 874 aaKnown RBP11.78□□□□□ -0.52
TPM3-202ENST00000302206 KMT2EQ8IZD2 1858 aa11.78□□□□□ -0.52
TPM3-202ENST00000302206 SPTBN4Q9H254 2564 aa11.77□□□□□ -0.52
TPM3-202ENST00000302206 TMEM221A6NGB7 291 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 NCF1BA6NI72 391 aaPredicted RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 NCF1CA8MVU1 366 aaPredicted RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 GFYI3L273 518 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 M0R296 226 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 PPP6CO00743 305 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 UBDO15205 165 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 TAPBPO15533 448 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 TSPAN6O43657 245 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 RNASEH1O60930 286 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 ATG13O75143 517 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CRCPO75575 148 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 TM7SF2O76062 418 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 RECQL5O94762 991 aaPredicted RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 ADH1BP00325 375 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 OTCP00480 354 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 ANXA5P08758 320 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 C6P13671 934 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 NCF1P14598 390 aaPredicted RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 HNRNPH1P31943 449 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 PGM1P36871 562 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 LTBRP36941 435 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 P2RY2P41231 377 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CPA2P48052 419 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 PSMD8P48556 350 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 AP1S2P56377 157 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 TCF15Q12870 199 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 GTF2H2Q13888 395 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 AGERQ15109 404 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 SMAD2Q15796 467 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 RBBP7Q16576 425 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 POM121L1PQ3SYA9 428 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 KHDC1Q4VXA5 237 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 GTF2H2CQ6P1K8 395 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 GOLGA7Q7Z5G4 137 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 SYVN1Q86TM6 617 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 PACS2Q86VP3 889 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 MMAAQ8IVH4 418 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 RASGEF1AQ8N9B8 481 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CFAP61Q8NHU2 1237 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CSGALNACT1Q8TDX6 532 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CXorf40AQ8TE69 158 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 ASB11Q8WXH4 323 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 DLG3Q92796 817 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 GLMNQ92990 594 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 RHBDF1Q96CC6 855 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 ZNF514Q96K75 400 aaPredicted RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 PPP1R36Q96LQ0 422 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CATSPER2Q96P56 530 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 LENG8Q96PV6 779 aaPredicted RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 P2RY13Q9BPV8 354 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CCM2Q9BSQ5 444 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 WRAP53Q9BUR4 548 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 CD244Q9BZW8 370 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 PARVBQ9HBI1 364 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 TMEM45AQ9NWC5 275 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 NDE1Q9NXR1 346 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CACNA2D2Q9NY47 1150 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 CNOT6Q9ULM6 557 aaKnown RBP11.77□□□□□ -0.53
TPM3-202ENST00000302206 ITM2BQ9Y287 266 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 FIS1Q9Y3D6 152 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 FADS3Q9Y5Q0 445 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 ST14Q9Y5Y6 855 aa11.77□□□□□ -0.53
TPM3-202ENST00000302206 K7EPI3 171 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 PIP5K1BO14986 540 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 VEGFDO43915 354 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 LZTS3O60299 673 aaPredicted RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 SOD1P00441 154 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 PRR35P0CG20 571 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 CYP2A7P20853 494 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 C5AR1P21730 350 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 TEAD1P28347 426 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 ACADVLP49748 655 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 HNMTP50135 292 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 GALK1P51570 392 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 METAP1P53582 386 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 MXRA7P84157 204 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 CNTN1Q12860 1018 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 TMEM115Q12893 351 aaPredicted RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 GRIK2Q13002 908 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 CYLC2Q14093 348 aaPredicted RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 PTK2BQ14289 1009 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 PHKG1Q16816 387 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 XKR7Q5GH72 579 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 PIP5KL1Q5T9C9 394 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 TMEM198Q66K66 360 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 OGFOD2Q6N063 350 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 ADAMTSL4Q6UY14 1074 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 UBE2R2Q712K3 238 aaPredicted RBP11.76□□□□□ -0.53
TPM3-202ENST00000302206 DET1Q7L5Y6 550 aa11.76□□□□□ -0.53
TPM3-202ENST00000302206 LRRC70Q7Z2Q7 622 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms