RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 SCLYQ96I15 445 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 C2orf49Q9BVC5 232 aaPredicted RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 LTB4R2Q9NPC1 389 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 HCSTQ9UBK5 93 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 AQP12BA6NM10 295 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 K7ERQ8 282 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 TAF4O00268 1085 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 STC1P52823 247 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 MAD2L1Q13257 205 aaPredicted RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 PARP15Q460N3 678 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 AQP12AQ8IXF9 295 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 CAMKK1Q8N5S9 505 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 DRAXINQ8NBI3 349 aaPredicted RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 ABHD8Q96I13 439 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 DYRK4Q9NR20 520 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 KRT87PA6NCN2 255 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 K7EPI3 171 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 ASNA1O43681 348 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 MITFO75030 526 aaPredicted RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 NDUFS2O75306 463 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 OR56A5P0C7T3 313 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 HOXB8P17481 243 aaPredicted RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 PTNP21246 168 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 SCNN1AP37088 669 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 ARSFP54793 590 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 ST8SIA6P61647 398 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 IL10RBQ08334 325 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 CHIT1Q13231 466 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 COLEC12Q5KU26 742 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 ENPP6Q6UWR7 440 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 DMRTB1Q96MA1 342 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 FARSBQ9NSD9 589 aaKnown RBP13.09□□□□□ -0.31
CASC4-201ENST00000299957 ADPRHL2Q9NX46 363 aa13.09□□□□□ -0.31
CASC4-201ENST00000299957 GLYATL1P3A0A0U1RQE8 302 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 I6L893 689 aaPredicted RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 DENRO43583 198 aaKnown RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 LDB2O43679 373 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 CBFA2T3O75081 653 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 MED26O95402 600 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 STATHP02808 62 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 SERPINA4P29622 427 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 GJA5P36382 358 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 MAGEA3P43357 314 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 INHBCP55103 352 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 TRAP1Q12931 704 aaKnown RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 TP53BP2Q13625 1128 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 GANABQ14697 944 aaKnown RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 RFX4Q33E94 735 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 IFNLR1Q8IU57 520 aaPredicted RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 PIANPQ8IYJ0 282 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 RBFAQ8N0V3 343 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 ZNF513Q8N8E2 541 aaPredicted RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 PCSK9Q8NBP7 692 aaKnown RBP13.08□□□□□ -0.31
CASC4-201ENST00000299957 OR5AK3PQ8NH89 298 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 FRS2Q8WU20 508 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 MYO19Q96H55 970 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 GNPTGQ9UJJ9 305 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 SPO11Q9Y5K1 396 aa13.08□□□□□ -0.31
CASC4-201ENST00000299957 KERAO60938 352 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 URODP06132 367 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 CTSKP43235 329 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 HCAR3P49019 387 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 RPS3AP61247 264 aaKnown RBP13.08□□□□□ -0.32
CASC4-201ENST00000299957 ZXDBP98169 803 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 CYP4F8P98187 520 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 TRIM32Q13049 653 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 SF1Q15637 639 aaKnown RBP13.08□□□□□ -0.32
CASC4-201ENST00000299957 UBXN11Q5T124 520 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 HMGN2P46Q86SG4 172 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 PROSER1Q86XN7 944 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 MFSD6LQ8IWD5 586 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 STK40Q8N2I9 435 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 TMEM174Q8WUU8 243 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 IRGQQ8WZA9 623 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 KCNC2Q96PR1 638 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 CORO1BQ9BR76 489 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 GSTO2Q9H4Y5 243 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 KLHL33A6NCF5 533 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 PDZK1P1A8MUH7 402 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 FPGTO14772 594 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 PER2O15055 1255 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 VILLO15195 856 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 TRBC1P01850 177 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 RAP2AP10114 183 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 CYP2A7P20853 494 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 MAGEA6P43360 314 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 CDH12P55289 794 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 TXNDC8Q6A555 127 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 TXNDC11Q6PKC3 985 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 TMPRSS11BQ86T26 416 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 GPR65Q8IYL9 337 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 SNX6Q9UNH7 406 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 SLC22A14Q9Y267 594 aa13.08□□□□□ -0.32
CASC4-201ENST00000299957 USP54Q70EL1 1684 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 EFCAB10A6NFE3 127 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 CLDN25C9JDP6 229 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 H7C4K7 107 aa13.07□□□□□ -0.32
CASC4-201ENST00000299957 IFRD1O00458 451 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms