RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 GBX1Q14549 363 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 PCSK7Q16549 785 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 C6orf136Q5SQH8 315 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 ANKS6Q68DC2 871 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 TWF2Q6IBS0 349 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 ALKAL1Q6UXT8 129 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 ARMCX2Q7L311 632 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 PARP16Q8N5Y8 322 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 TM9SF3Q9HD45 589 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 CCNB1IP1Q9NPC3 277 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 RBM22Q9NW64 420 aaKnown RBP eCLIP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 UBQLN1Q9UMX0 589 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 MROH6A6NGR9 719 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 ONECUT3O60422 494 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 USP2O75604 605 aaPredicted RBP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 WARSP23381 471 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 TSPY1Q01534 308 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 DPP9Q86TI2 863 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 HIPK1Q86Z02 1210 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 RIOX2Q8IUF8 465 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 FBXO39Q8N4B4 442 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 FNDC5Q8NAU1 212 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 OR6P1Q8NGX9 317 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 GIPC2Q8TF65 315 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 PYCR2Q96C36 320 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 PDLIM5Q96HC4 596 aaKnown RBP13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 SIGLEC11Q96RL6 698 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 MIR1-1HGQ9H1L0 117 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 ACTL8Q9H568 366 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 HEBP1Q9NRV9 189 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 FBXL12Q9NXK8 326 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 ERVW-1Q9UQF0 538 aa13.3□□□□□ -0.28
RPUSD4-201ENST00000298317 OR51F1A6NGY5 319 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 EVPLLA8MZ36 301 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SUPT3HB4E1H0 165 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 CCL22O00626 93 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 GABRDO14764 452 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 MITFO75030 526 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 IFNA8P32881 189 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 HTR3AP46098 478 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 RABGGTBP53611 331 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 HUNKP57058 714 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 FOXD4Q12950 439 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 EIF2B5Q13144 721 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 CDK10Q15131 360 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 BRMS1LQ5PSV4 323 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 TPRG1LQ5T0D9 272 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 ZNF544Q6NX49 715 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SCIMPQ6UWF3 145 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 LBX2Q6XYB7 198 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 GPRIN1Q7Z2K8 1008 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 CTU1Q7Z7A3 348 aaKnown RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 C1QTNF3Q9BXJ4 246 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SLC39A8Q9C0K1 460 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 C6orf62Q9GZU0 229 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 MAGIXQ9H6Y5 334 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 VAPAQ9P0L0 249 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 AASSQ9UDR5 926 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 GPSM3Q9Y4H4 160 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 GSTA4O15217 222 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 CD4P01730 458 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 HOXB8P17481 243 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 MAGP20916 626 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 IGFBP5P24593 272 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SCNN1GP51170 649 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 YWHAHQ04917 246 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 CDONQ4KMG0 1287 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SPATC1Q76KD6 591 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 BHLHA9Q7RTU4 235 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 FAM126BQ8IXS8 530 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 NLGN4XQ8N0W4 816 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 NATD1Q8N6N6 113 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 ZNF540Q8NDQ6 660 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SIMC1Q8NDZ2 872 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 SLC38A4Q969I6 547 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 KIAA1191Q96A73 305 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 ACOX2Q99424 681 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 C2orf49Q9BVC5 232 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 GABARAPL1Q9H0R8 117 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 IRF2BPLQ9H1B7 796 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 PKP3Q9Y446 797 aa13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 ARIH1Q9Y4X5 557 aaPredicted RBP13.29□□□□□ -0.28
RPUSD4-201ENST00000298317 PDCD11Q14690 1871 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 IFRD1O00458 451 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 SNX4O95219 450 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 LCKP06239 509 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 USP17L7P0C7H9 530 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 HOXA11P31270 313 aaPredicted RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 PNPLA4P41247 253 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 CLK1P49759 484 aaKnown RBP13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 TAF6P49848 677 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 FBXO48Q5FWF7 155 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 CYP4Z1Q86W10 505 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 SLC10A4Q96EP9 437 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 ITPAQ9BY32 194 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 NUDT5Q9UKK9 219 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 ANGPTL3Q9Y5C1 460 aa13.28□□□□□ -0.28
RPUSD4-201ENST00000298317 NYNRINQ9P2P1 1898 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms