RNA–Protein interactions for RNA: ENST00000297661.8

UBAP1-201, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,735 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-201ENST00000297661 ACOX2Q99424 681 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 SEPT5Q99719 369 aaPredicted RBP15.35■□□□□ 0.05
UBAP1-201ENST00000297661 SPON2Q9BUD6 331 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 CRISPLD1Q9H336 500 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 FBXO8Q9NRD0 319 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 DOCK4Q8N1I0 1966 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 TCRBV5S2A0A599 114 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 ASNA1O43681 348 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 CRCPO75575 148 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 RHOBTB1O94844 696 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 E2F2Q14209 437 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 NADSYN1Q6IA69 706 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 TAS2R42Q7RTR8 314 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 RTN4RL1Q86UN2 441 aaPredicted RBP15.35■□□□□ 0.05
UBAP1-201ENST00000297661 GALNT13Q8IUC8 556 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 LRRC49Q8IUZ0 686 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 PIK3C3Q8NEB9 887 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 OR4L1Q8NH43 312 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 NDNFQ8TB73 568 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 HBEGFQ99075 208 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 ZBED2Q9BTP6 218 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 TRIT1Q9H3H1 467 aaKnown RBP15.35■□□□□ 0.05
UBAP1-201ENST00000297661 CPNE5Q9HCH3 593 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 CATSPERZQ9NTU4 200 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 SLAMF8Q9P0V8 285 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 PCDHB8Q9UN66 801 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 NDUFAF1Q9Y375 327 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 PCDHGA11Q9Y5H2 935 aa15.35■□□□□ 0.05
UBAP1-201ENST00000297661 SNPHO15079 494 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 TSPAN3O60637 253 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 COL6A1P12109 1028 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ALDH4A1P30038 563 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 PBX3P40426 434 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ARSFP54793 590 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 SERINC3Q13530 473 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 CLLU1OSQ5K130 101 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 MIER2Q8N344 545 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 TEX26Q8N6G2 289 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 OR6Q1Q8NGQ2 317 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 GIPC2Q8TF65 315 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ARPC5LQ9BPX5 153 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 OSBPL10Q9BXB5 764 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 POLR1EQ9GZS1 481 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 RNF112Q9ULX5 631 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ASB1Q9Y576 335 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 NPEPPSL1A6NEC2 478 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ARVCFO00192 962 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 SCAMP3O14828 347 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ENO2P09104 434 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 GP2P55259 537 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 LSM3P62310 102 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 CDC20Q12834 499 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 VARS2Q5ST30 1063 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 MRNIPQ6NTE8 343 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 PHYKPLQ8IUZ5 450 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 C8orf59Q8N0T1 100 aaPredicted RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 HDAC2Q92769 488 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.34■□□□□ 0.053e-6■■■■□ 20.9
UBAP1-201ENST00000297661 RMDN1Q96DB5 314 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 ATOH8Q96SQ7 321 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 TSEN34Q9BSV6 310 aaKnown RBP15.34■□□□□ 0.05
UBAP1-201ENST00000297661 TRMOQ9BU70 441 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 BDH2Q9BUT1 245 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 NEK6Q9HC98 313 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 BPIFA1Q9NP55 256 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 PDE10AQ9Y233 779 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 PCDHGA8Q9Y5G5 932 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 PMF1-BGLAPU3KQ54 211 aa15.34■□□□□ 0.05
UBAP1-201ENST00000297661 OR1I1O60431 355 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 RPP40O75818 363 aaKnown RBP15.33■□□□□ 0.05
UBAP1-201ENST00000297661 TYMPP19971 482 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 GSK3BP49841 420 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 ATP4BP51164 291 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 GALNT1Q10472 559 aaPredicted RBP15.33■□□□□ 0.05
UBAP1-201ENST00000297661 MEP1AQ16819 746 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 DGUOKQ16854 277 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 CTXN3Q4LDR2 81 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 TMEM236Q5W0B7 351 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 RAB44Q7Z6P3 723 aaPredicted RBP15.33■□□□□ 0.05
UBAP1-201ENST00000297661 ADCK1Q86TW2 530 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 PAPD5Q8NDF8 572 aaKnown RBP15.33■□□□□ 0.05
UBAP1-201ENST00000297661 OR4K2Q8NGD2 314 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 PSMA8Q8TAA3 256 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 OSCP1Q8WVF1 389 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 LRRC58Q96CX6 371 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 TMEM74Q96NL1 305 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 CDK15Q96Q40 435 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 CLSTN3Q9BQT9 956 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 ALOXE3Q9BYJ1 711 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 RNF38Q9H0F5 515 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 LTB4R2Q9NPC1 389 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 MED16Q9Y2X0 877 aa15.33■□□□□ 0.05
UBAP1-201ENST00000297661 MAGED1Q9Y5V3 778 aaPredicted RBP15.33■□□□□ 0.05
UBAP1-201ENST00000297661 MAN1A2O60476 641 aa15.33■□□□□ 0.04
UBAP1-201ENST00000297661 NDUFS2O75306 463 aa15.33■□□□□ 0.04
UBAP1-201ENST00000297661 ECI2O75521 394 aa15.33■□□□□ 0.04
UBAP1-201ENST00000297661 THRBP10828 461 aa15.33■□□□□ 0.04
UBAP1-201ENST00000297661 CD40LGP29965 261 aa15.33■□□□□ 0.04
UBAP1-201ENST00000297661 ARL1P40616 181 aaPredicted RBP15.33■□□□□ 0.04
UBAP1-201ENST00000297661 ALDH3A2P51648 485 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms