RNA–Protein interactions for RNA: ENST00000296682.3

PRDM9-201, Transcript of PR/SET domain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRDM9, Length 3,691 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9-201ENST00000296682 TBC1D3BA6NDS4 549 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 STK16O75716 305 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 CLPTM1O96005 669 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 RHOP08100 348 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 ANXA5P08758 320 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 PABPC1P11940 636 aaKnown RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 IDO1P14902 403 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 GSSP48637 474 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 CDH15P55291 814 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SATB1Q01826 763 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 TLR1Q15399 786 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SNX20Q7Z614 316 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SATL1Q86VE3 508 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 TMEM126BQ8IUX1 230 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 PHACTR4Q8IZ21 702 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 PIH1D2Q8WWB5 315 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 KLK6Q92876 244 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 ACDQ96AP0 544 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 RIOK2Q9BVS4 552 aaKnown RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 PCTPQ9UKL6 214 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 EIF3LQ9Y262 564 aaKnown RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 MED16Q9Y2X0 877 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SAP18O00422 153 aaKnown RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 NME4O00746 187 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 LEFTY1O75610 366 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 OR56A5P0C7T3 313 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 HOXB8P17481 243 aaPredicted RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 HNF4AP41235 474 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 GTF2H3Q13889 308 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 TMEM214Q6NUQ4 689 aaKnown RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 PDSS2Q86YH6 399 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SLC15A3Q8IY34 581 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 TCEAL8Q8IYN2 117 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 LILRA3Q8N6C8 439 aaPredicted RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 OR2T11Q8NH01 316 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 OR10A6Q8NH74 314 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SNX19Q92543 992 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 KCNJ9Q92806 393 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 FAM162AQ96A26 154 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 SLC29A1Q99808 456 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 CCT7Q99832 543 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 PCDH12Q9NPG4 1184 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 MBD1Q9UIS9 605 aaPredicted RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 LZTS1Q9Y250 596 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 DHRS7Q9Y394 339 aa9.14□□□□□ -0.95
PRDM9-201ENST00000296682 CFAP20Q9Y6A4 193 aaKnown RBP9.14□□□□□ -0.95
PRDM9-201ENST00000296682 MYO1GB0I1T2 1018 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ZNF682O95780 498 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 OTCP00480 354 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GNRH1P01148 92 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 AQP1P29972 269 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 PPM1AP35813 382 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 IRF8Q02556 426 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 NAE1Q13564 534 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ADGRE1Q14246 886 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 MAPKAPK3Q16644 382 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ZNF284Q2VY69 593 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 LRRC23Q53EV4 343 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 INO80DQ53TQ3 878 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ANKRD26P1Q6NSI1 321 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 C22orf39Q6P5X5 142 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 C11orf96Q7Z7L8 435 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 STK32CQ86UX6 486 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 LIX1Q8N485 282 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 HMGCLL1Q8TB92 370 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ZSWIM3Q96MP5 696 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 C19orf43Q9BQ61 176 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ADNPQ9H2P0 1102 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 FAM83DQ9H4H8 585 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ALG2Q9H553 416 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 IL21Q9HBE4 155 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 NUMA1Q14980 2115 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 hCG_2014768A0A024R1R8 64 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ANTXRLA6NF34 631 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CFAP99D6REC4 459 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CASQ2O14958 399 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SLC26A3P40879 764 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 LAPTM5Q13571 262 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 HERC3Q15034 1050 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 FNDC3BQ53EP0 1204 aaKnown RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SETMARQ53H47 684 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 GRAMD4Q6IC98 578 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 FAM180BQ6P0A1 224 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 C8orf82Q6P1X6 216 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 FBXL19Q6PCT2 694 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ZNF621Q6ZSS3 439 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 NECAB2Q7Z6G3 386 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SLC44A2Q8IWA5 706 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 C7orf61Q8IZ16 206 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 TMEM159Q96B96 161 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 ASB2Q96Q27 587 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 OR52E6Q96RD3 313 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 C11orf49Q9H6J7 331 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 MRPL40Q9NQ50 206 aaKnown RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SH3BP4Q9P0V3 963 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 SARDHQ9UL12 918 aa9.13□□□□□ -0.95
PRDM9-201ENST00000296682 CORO1CQ9ULV4 474 aaPredicted RBP9.13□□□□□ -0.95
PRDM9-201ENST00000296682 TDRKHQ9Y2W6 561 aaKnown RBP9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms