RNA–Protein interactions for RNA: ENST00000295701.9

CNOT9-202, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

TSL 1 (best) BASIC

Gene CNOT9, Length 1,126 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-202ENST00000295701 WWP1Q9H0M0 922 aa9.06□□□□□ -0.96
CNOT9-202ENST00000295701 CHST8Q9H2A9 424 aa9.06□□□□□ -0.96
CNOT9-202ENST00000295701 RAD18Q9NS91 495 aa9.06□□□□□ -0.96
CNOT9-202ENST00000295701 IL17CQ9P0M4 197 aa9.06□□□□□ -0.96
CNOT9-202ENST00000295701 FAM8A1Q9UBU6 413 aa9.06□□□□□ -0.96
CNOT9-202ENST00000295701 VPS4AQ9UN37 437 aa9.06□□□□□ -0.96
CNOT9-202ENST00000295701 LUC7L2Q9Y383 392 aaKnown RBP9.06□□□□□ -0.96
CNOT9-202ENST00000295701 CREBBPQ92793 2442 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 DOCK10Q96BY6 2186 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 A0A0A6YYK5 440 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 LOC285095A0A1B0GVY8 99 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 UBA6A0AVT1 1052 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 A1L4Q6 167 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 OR6C74A6NCV1 312 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 A6NJY4 79 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 A6NL46 340 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 GOLGA6L22H0YM25 854 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ZNF185O15231 689 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 PECAM1P16284 738 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 NFKB1P19838 968 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 HALP42357 657 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ARL4DP49703 201 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 PGDP52209 483 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 KPNA2P52292 529 aaKnown RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 RPS15P62841 145 aaKnown RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ACY1Q03154 408 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ADCY2Q08462 1091 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 WASHC5Q12768 1159 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ABRQ12979 859 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 PLCL1Q15111 1095 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ASTE1Q2TB18 679 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 EIF2S3LQ2VIR3 472 aaKnown RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 DNTTIP2Q5QJE6 756 aaKnown RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 PLEKHS1Q5SXH7 462 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 GPRC6AQ5T6X5 926 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 CCDC70Q6NSX1 233 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 SYVN1Q86TM6 617 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 RHOT1Q8IXI2 618 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 LILRA3Q8N6C8 439 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 Q8NA96 180 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 GALNT11Q8NCW6 608 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 BLOC1S5Q8TDH9 187 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 CTNNBL1Q8WYA6 563 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ZNF501Q96CX3 271 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 OXNAD1Q96HP4 312 aaPredicted RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 TEKT5Q96M29 485 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 C12orf66Q96MD2 445 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 TTC25Q96NG3 672 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 MAK16Q9BXY0 300 aaKnown RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 GPR87Q9BY21 358 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ING2Q9H160 280 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 C10orf88Q9H8K7 445 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 MLXIPLQ9NP71 852 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ACSS2Q9NR19 701 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 IMP3Q9NV31 184 aaKnown RBP9.05□□□□□ -0.96
CNOT9-202ENST00000295701 HRASLS2Q9NWW9 162 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 IFNKQ9P0W0 207 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 FAM153AQ9UHL3 310 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 ITPR2Q14571 2701 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 CNTRLQ7Z7A1 2325 aa9.05□□□□□ -0.96
CNOT9-202ENST00000295701 DIDO1Q9BTC0 2240 aaKnown RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 ZGRF1Q86YA3 2104 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 OR5K3A6NET4 321 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 TLCD2A6NGC4 264 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 SLC9B1P1A6NJY1 282 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 PPP1R12AO14974 1030 aaPredicted RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 SGTAO43765 313 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 SCRG1O75711 98 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 SORBS2O94875 1100 aaKnown RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 IGHA1P01876 353 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 KRT1P04264 644 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 POLBP06746 335 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 CAPN1P07384 714 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 MTHFD1P11586 935 aaKnown RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 VCLP18206 1134 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 POLR2CP19387 275 aaPredicted RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 HMGCLP35914 325 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 SPAM1P38567 509 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 ITGA1P56199 1179 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 HSD11B2P80365 405 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 DMPKQ09013 629 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 XRCC4Q13426 336 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 OLIG2Q13516 323 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 RAPSNQ13702 412 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 PRKD1Q15139 912 aaPredicted RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 INPP5JQ15735 1006 aaPredicted RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 PPP2R5EQ16537 467 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 SLC18A3Q16572 532 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 FNBP1LQ5T0N5 605 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 METRNLQ641Q3 311 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 KAZNQ674X7 775 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 DAAM2Q86T65 1068 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 TMEM126BQ8IUX1 230 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 TMEM151BQ8IW70 566 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 ZNF295-AS1Q8N0V1 137 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 ZBTB2Q8N680 514 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 RBMXL3Q8N7X1 1067 aaKnown RBP9.04□□□□□ -0.96
CNOT9-202ENST00000295701 GOLGA6L1Q8N7Z2 621 aa9.04□□□□□ -0.96
CNOT9-202ENST00000295701 FDCSPQ8NFU4 85 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms